Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi479g00051 ATGGCAGAAATTGCGGTGAACCTGGTGATTGACAAGCTGATTCCATTGCTGAGGTATGAAGTGGCAGTGCTGAAAGAGGTGCACAATCAGGTAGCCGACATCAAGGATCAATTAGGCCTGATACGAGCATACCTGAGGGATGCAGATGTGAAAGCAGATAGAGAAGAAAGGAGTGATGTGGTGAAAGAGTGGGTGAAGCAAGTGAGGGAAGTAGCGCATCGAATTGAAGATGTGATCGATGAATACCTGCTCCAAGTTGCGGAGCGGAGGCAAAAGCGTGGAATAATTGGTGTGGTAGAGAAGATAGCGCGGTTGTTGAGAAGCATAGAGCCGCGACGTGTGATAACCGCAGAGATTCGTGATATCAACACAGTGATAGCCACACTTGATAAACGGAAAGACGTTTTGGGGTTCAATCCAATTGCGGAGTCAAGCAGTGCTGCAAAGACTTTTACTACGGTGTCAGGGCATGACCTTCGAAGGGCTGCACTGTTCCTTCATGATGCTAAGCTTGTGGGAATCAACGATTCAAAAAGGAAACTCAAAAGCTTGCTCGTGGAGGAAGATTCTAGACGCACCATCATCGCCATTGTTGGCACCGGGGGACTCGGTAAAACAACAATTGCGAAGAAACTATATGAGATGGAGAAACAAAAAAAGTTCGATTGCAGTGCTTGGGTGCCTGTGTCTAGCACGTTCAAGGAGAAGAAAATATTTAGGATGATGTTGCAAAGCTTTTATGACCAAGAGGATGAGGATCATGATGAGACTAAGGCCGTGCTAATTAAGAAAATGAACAAGGCCACTCTGATAAGAAAAGTGAGAGAATATTTGCAAGAAAGGAGATATCTGATTGTGTTTGATGATGTTTGGGCAGAAGACTTTTGGGGTTGTGTGGAATTTTCATTACCAGAAAATAACAGAGGAAGCAAAATACTCATCACAACAAGACACATGGGTGTTGCACAATTTTGCAAGAGCTATGCTCATGTTCACATCCATGAGTTGAAAACTTTGTGTTCAAAGCATGCCATGGAATTATTCCATTCCAAGGCATTTCAGTTTCATCCAGAAGGGTGTCCCATAGAACTAATGAAATTGTCACAAGACATTGTGAACAAGTGTGATGGAGTGCCACTAGCTATTGTCTCCATTGCCAGTCTCCTTTCCACAAAAAACAACAACATTTCTGAATGGCAAAAGGTTCATGATAGTCTTGGCTCAAGACTAGCTAGTGATCCTCATCTTAAAAGCTACCACCAAGTCTTATCAGAAAGTTACCATGATCTTCCTTCCCACCTTAAGCCATGCCTCTTGTACTTTGGCCTTTTCCCTAATGGCTACTCTATCAGGTGTGCAAGACTTCTTCGTCTATGGATAGCAGAGAGATTTGTAAATGTAAATGAGAATGAAAATCGTACCCAAGAGGAAGTTGCTGAAGAATACTTGGATGAATTGATTCGTAGGAGTCTAGTTATAGTGTCCTCTAAGTTTATTGATGGCAGGGCCAGAACCTGTAAGGTGCATGATCTGTTGCATGACTTTATTAAGGGAAAGTGTTTGGAGTTGGACTTTTGCCAAGTGATAAGAAATGAAAACTTTACCTTCAATGCAACAACTAGACGTTTGTCAATCCAATTGGAACCTAACAAAGAAAAAGATGCTTTAGCACTTGAAAGAGTTATTGTAGCAGATCATGGTCGAGTACGGTTCTGTTTTGCTTTTAACTTGGATGAGATGCCAAGGTCTCTGGTGAAATCCTTCTTCTCCAGCTTCAAGCTCTTAGTAGGATTGGATTTTGAAAATGCCCCTCTTGATCATCTTCCTGATGCAGTTGGATACTTATTGCATCTCAAGTATTTGAACTTACAGAATACCAAAATCAAGTCCCTTCCAAGGTTCATTGGCAAGCTTCAGAACCTAGAGACTCTAGATATAAAATACACTCAAGTGCATGAGTTACCTAGTGAGATTAACATGCTCACAAGGCTTCGCCATCTTCTGGCATCTTCCATCAATGAGGTAACAGGATTCCATTCAGCATCTATGCAAGGAGTGGTGGTAAAGAAAGGGATTGGGGATTTAAAGGAGCTGCAAAAGCTATCAAGAGTTGATATGAGTAATGGAGATAGCCTAATCAAGGAAGTGAAAAAATTGAAGCAATTGGGAAGACTTGGACTTGTTAAGCTAAGAGGACATCATGGAAAACAGTTGTGCATTGCAATAGAGGGAATGACACATCTTCAGTCTTTGAACATTGCAGCAGCAGAGGAGCATGAAATTCTTGACCTGCACTCATTGGTTAATCCTCCTCATAACCATCTCCAACGCCTCTATCTACATGCACGTTTAGAAACTCTGCCACGTTGGATTTCAAAGCTCCATGTTCTGGTGAAATTATTCTTGGATTGGTCAAGATTAACGGAAGATCCACTACCATTTCTTAAAGACTTGCCAGAGTTGTTGGAGCTTGAGCTTTATAATGCATTTGAAGGTGTTGAGTTGTATATAGGAAAGGGTTGGTTCAAAAAATTGAAAGATTTACGCTTAGAAAAGATGCAAGCCTTGAAGACCTTGAAAATAGATAAAGGAGCACTGCCTCTTCTTGAAAAGCTGACAATTGGGCCATGCCCTCAAATGGAGGAGGTTCCTCATGACATCCAGAATCTACAAGCTCTCCAACATCTTCGGTTCTATGAAATGCCTATGAACCCAATGGAAGAGAATGGTTGTGGCATATTGAAGAACATACCATTTGTGTTGTACTCCAAGGGCAACAAGTTCTACACTCTTCACAATGATGCAGGGAATGAAATCGATGACTTTTAG 2829 0.4175 MAEIAVNLVIDKLIPLLRYEVAVLKEVHNQVADIKDQLGLIRAYLRDADVKADREERSDVVKEWVKQVREVAHRIEDVIDEYLLQVAERRQKRGIIGVVEKIARLLRSIEPRRVITAEIRDINTVIATLDKRKDVLGFNPIAESSSAAKTFTTVSGHDLRRAALFLHDAKLVGINDSKRKLKSLLVEEDSRRTIIAIVGTGGLGKTTIAKKLYEMEKQKKFDCSAWVPVSSTFKEKKIFRMMLQSFYDQEDEDHDETKAVLIKKMNKATLIRKVREYLQERRYLIVFDDVWAEDFWGCVEFSLPENNRGSKILITTRHMGVAQFCKSYAHVHIHELKTLCSKHAMELFHSKAFQFHPEGCPIELMKLSQDIVNKCDGVPLAIVSIASLLSTKNNNISEWQKVHDSLGSRLASDPHLKSYHQVLSESYHDLPSHLKPCLLYFGLFPNGYSIRCARLLRLWIAERFVNVNENENRTQEEVAEEYLDELIRRSLVIVSSKFIDGRARTCKVHDLLHDFIKGKCLELDFCQVIRNENFTFNATTRRLSIQLEPNKEKDALALERVIVADHGRVRFCFAFNLDEMPRSLVKSFFSSFKLLVGLDFENAPLDHLPDAVGYLLHLKYLNLQNTKIKSLPRFIGKLQNLETLDIKYTQVHELPSEINMLTRLRHLLASSINEVTGFHSASMQGVVVKKGIGDLKELQKLSRVDMSNGDSLIKEVKKLKQLGRLGLVKLRGHHGKQLCIAIEGMTHLQSLNIAAAEEHEILDLHSLVNPPHNHLQRLYLHARLETLPRWISKLHVLVKLFLDWSRLTEDPLPFLKDLPELLELELYNAFEGVELYIGKGWFKKLKDLRLEKMQALKTLKIDKGALPLLEKLTIGPCPQMEEVPHDIQNLQALQHLRFYEMPMNPMEENGCGILKNIPFVLYSKGNKFYTLHNDAGNEIDDF 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi479g00051 942 Gene3D Ribonuclease Inhibitor 567 928 IPR032675 -
Sebi479g00051 942 Gene3D - 4 116 - -
Sebi479g00051 942 PRINTS Disease resistance protein signature 696 712 - -
Sebi479g00051 942 PRINTS Disease resistance protein signature 277 291 - -
Sebi479g00051 942 PRINTS Disease resistance protein signature 194 209 - -
Sebi479g00051 942 PRINTS Disease resistance protein signature 375 389 - -
Sebi479g00051 942 FunFam Probable disease resistance protein At1g61300 156 330 - -
Sebi479g00051 942 PANTHER DISEASE RESISTANCE PROTEIN RP 62 869 IPR044974 GO:0006952
Sebi479g00051 942 SUPERFAMILY L domain-like 507 911 - -
Sebi479g00051 942 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 441 IPR027417 -
Sebi479g00051 942 CDD RX-CC_like 2 124 IPR038005 -
Sebi479g00051 942 Gene3D - 426 520 IPR036388 -
Sebi479g00051 942 Gene3D - 152 333 IPR027417 -
Sebi479g00051 942 Pfam NB-ARC domain 176 427 IPR002182 GO:0043531
Sebi479g00051 942 FunFam Probable disease resistance protein At1g63360 427 517 - -
Sebi479g00051 942 Pfam Rx N-terminal domain 5 92 IPR041118 -
Sebi479g00051 942 Gene3D - 339 425 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi479g00051 Sebi-Chr479 673954 678384 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi479g00051 195 382 WRKY Transcription Factor Family AT5G45050 25.389 8.38e-07 51.2