Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi479g00046 ATGCCATTAAAAAGGCATTCTTACATAGTCTATTTAGGATCACATTCTCATGGTCCAAACCCTTCAGCAAGTGATCTTGAATCTGCAACAAATTTCCATTACAATTTATTAGGATCACACTTGGGAAGCCATGAGAAGGCCAAAGAAGCAATATTTTACTCATATAATAAACACATCAATGGTTTTGCTGCTGTACTTGAAGAGGAAGAAGCAGCAGAGATAGCAGAAAATCCAAATGTAGTTTCTGTGTTTTTGAACAAAGGGCATGAACTGCAAACAACTAGATCATGGGAATTTCTTGGGCTAGAGAGTAATGGGGTAGTTCCCAAAGACTCCATATGGGAGAAGGCAAGATATGGTGAGGGTACAATCATTGCTAACTTTGATACAGGTGTTTGGCCTGAATCTAAAAGCTTCAGTGACTATGGAATGGGCCCTGTCCCATCAAGGTGGCGTGGGATCTGTCAACTTGACAATTTTCACTGTAATAGGAAATTGATAGGAGCAAGATTCTTTAGCAAGGGTTATGAGTCAAAATATGGAAAATTAAACACATCCCTTTATACAGCAAGGGATGTAGTAGGCCATGGTGGCCCAACTCTATCAATTGCTGGAGGTAATTTTGTGTCAGGAGCAAGTGTTTTTGGCTATGGTAATGGCACTGCCAAGGGTGGCTCCCCTAGAGCCCATGTTGCAGCCTACAAGGTGTGCTGGCTTGGGACCATTCTTGATTGCACTGATGCAGATATATTGGGAGCTTTTGAGGCTGCTATAAGTGATGGGGTTGATATAATTTCCTGTTCCCTGGGTAGGAATACTCCCACAGAATTTTTTGAAGATGGCCTTTCCATAGGGGCCTTCCATGCAGTTGCCAATGGTATAATAGTAATTGCTTCTGGAGGCAATAGTGGACCAGAACCTGGAACTGTAACTAATGTGGCACCATGGTTGTTCAGTGTTGGTGCTAGCACTATAGACAGAAAATTTACTAATTATCTAGCACTTGGCAACAAGAAGCACCTAATGGGAGCTAGTCTTTCTACAGGATTGCCATCTGAGAAATTCTACTCTTTGATCAATTCTGTAGATGCTAAAGTTGCTAATGCAACAATTGAGGATGCTCAACACTGTAAGATTGGAACTCTTGATCCTAAGAAGGTAAAGGGCAAAATCCTGGTCTGCCTCATAAGGGAGACTAATGGATTAATTTATGCAGAGGCTCAAGCTCTTTCTACAGGCGCAGTAGGACTAATTTTGGCAAATAATAAGCAACGTGGCAATAACATTATGGCATATGCTCATCTATTGCCTACTTCACACATCAATTACACAGATGGTGAACATGTTTATTCCTACATCAAAGACACCAAGACCCCTATGGTTTACATGACAAGAGCCAAAACTCTACTAGGAGTAAAACCAGCTCCTGTAATAGCTTCATTCTCATCTAGGGGACCTAACTCCATCCAACCAATAATCCTCAAGCCTGATATCACTGCACCAGGTGTGGACATTCTTTTTGCATTCACAGAAGCCATAAGTCCAACTGGTCTTCCATCAGATAATCGCCGGATTCCATATAATATTGGGTCAGGAACTTCTGCATCTTGCCCTCATATTTCTGGAATTGTTGGTCTTCTCAAAACACTCTATCCCAATTGGAGTCCTGCAGCCTTGAGATCTGCTATCATGACTACTGCAATGATACTAGATGACAATAACAGACCAATTATGGATCAATATAAGGAAGAAGCAACACCATTTGCTTATGGTGCAGGACACATTCAACCAGAACTTGCAATGGACCCTGGACTTGTGTATGATCTAAATGCTGTTGATTACTTGAATTTCCTATGTGGTCATGGTTACAACCATACACAAATGAGAATGTTTTCTAGGAAGCCCCACACTTGTTCAAAGTCTTACAACATGTTAGATTTTAACTATCCTTCAATCACAGTGCCTAATCTTGGGAAACACTCTGTAAAAGTTACTCGCACAGTTACAAATGTTGGGTCACCAGGTACATATCATGTGCATGTCAAGGCACCTGATGGGGTTTCAGTTATGGTTGAGCCAAGATCCTTGTCATTTAGTAAAGTTGGTGAGAAGAAGACATTCAAGGTCATTTTGAAGGGCAGCAAAGGTGCATCATCAGGTTATGTGTTTGGTTACTTATGGTGGTCAGATGGGAGGCATAGAATCAAGAGTCCTCTTGTGGTGAAACATAAATAG 2235 0.4125 MPLKRHSYIVYLGSHSHGPNPSASDLESATNFHYNLLGSHLGSHEKAKEAIFYSYNKHINGFAAVLEEEEAAEIAENPNVVSVFLNKGHELQTTRSWEFLGLESNGVVPKDSIWEKARYGEGTIIANFDTGVWPESKSFSDYGMGPVPSRWRGICQLDNFHCNRKLIGARFFSKGYESKYGKLNTSLYTARDVVGHGGPTLSIAGGNFVSGASVFGYGNGTAKGGSPRAHVAAYKVCWLGTILDCTDADILGAFEAAISDGVDIISCSLGRNTPTEFFEDGLSIGAFHAVANGIIVIASGGNSGPEPGTVTNVAPWLFSVGASTIDRKFTNYLALGNKKHLMGASLSTGLPSEKFYSLINSVDAKVANATIEDAQHCKIGTLDPKKVKGKILVCLIRETNGLIYAEAQALSTGAVGLILANNKQRGNNIMAYAHLLPTSHINYTDGEHVYSYIKDTKTPMVYMTRAKTLLGVKPAPVIASFSSRGPNSIQPIILKPDITAPGVDILFAFTEAISPTGLPSDNRRIPYNIGSGTSASCPHISGIVGLLKTLYPNWSPAALRSAIMTTAMILDDNNRPIMDQYKEEATPFAYGAGHIQPELAMDPGLVYDLNAVDYLNFLCGHGYNHTQMRMFSRKPHTCSKSYNMLDFNYPSITVPNLGKHSVKVTRTVTNVGSPGTYHVHVKAPDGVSVMVEPRSLSFSKVGEKKTFKVILKGSKGASSGYVFGYLWWSDGRHRIKSPLVVKHK 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi479g00046 744 SUPERFAMILY Subtilisin-like 92 605 IPR036852 GO:0004252|GO:0006508
Sebi479g00046 744 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 8 741 IPR045051 -
Sebi479g00046 744 PRINTS Subtilisin serine protease family (S8) signature 531 547 IPR015500 -
Sebi479g00046 744 PRINTS Subtilisin serine protease family (S8) signature 120 139 IPR015500 -
Sebi479g00046 744 ProSiteProfiles Serine proteases, subtilase domain profile. 96 601 - -
Sebi479g00046 744 FunFam subtilisin-like protease SBT1.5 326 470 - -
Sebi479g00046 744 Pfam Subtilase family 120 593 IPR000209 GO:0006508|GO:0008236
Sebi479g00046 744 FunFam Subtilisin-like protease SBT1.5 618 744 - -
Sebi479g00046 744 FunFam Subtilisin-like protease SBT5.3 2 92 - -
Sebi479g00046 744 FunFam Subtilisin-like protease SBT1.5 122 337 - -
Sebi479g00046 744 Gene3D - 618 743 - -
Sebi479g00046 744 ProSitePatterns Serine proteases, subtilase family, serine active site. 532 542 IPR023828 -
Sebi479g00046 744 Gene3D - 326 470 - -
Sebi479g00046 744 CDD Peptidases_S8_3 89 567 IPR034197 -
Sebi479g00046 744 Gene3D Peptidase S8/S53 domain 122 614 IPR036852 GO:0004252|GO:0006508
Sebi479g00046 744 Pfam Peptidase inhibitor I9 7 88 IPR010259 -
Sebi479g00046 744 Pfam Fibronectin type-III domain 646 741 IPR041469 -
Sebi479g00046 744 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 3 92 IPR037045 -
Sebi479g00046 744 CDD PA_subtilisin_like 335 461 - -
Sebi479g00046 744 Pfam PA domain 375 447 IPR003137 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi479g00046 Sebi-Chr479 576567 580576 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi479g00046 7 742 Subtilisin-like Serine Gene Family AT2G04160 57.873 0.0 848
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi479g00046 - - pcin:129318364 1093.57