Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi479g00035 ATGAGAGGTCTGCATCTGGGTTCAAAGGGCCCTGTGGTGGGAAAAGAAACTGATAATGTTCAGCAAGGTAGTTGTCCCTTTGTTTTGGAGGATGATGGGGAAGGTGTCTATGTTGTAGATGAGAATTGGGGCAATAGCTGTGCAGTAGAGGGTGTGGAACATACTGGTGGTCCAAATTTATCAGATAATAATGGTGCAACTGGCGAAGGTTATTATTGTGACGGTGAAAATGGGGGTGTTTTTTTGGTAGGAGAAGATTGGAATGATGAAAACTTGGAAGTTGATGGGGATAATGGTGGAGGGGATAAAATTTTAGTTGATACAAATGATGATATACTTAAGATGGGTGACTTGTCCTTCTTTAGTCCTCACGAAATAGAGAGATATGAATTTGGAAGTGTTGACATAGCATACAAGTTTTATTTTGAATATGGGTTTGCTAATGGGTTTGGGATACGAAAGGGTCGTTCTTTGAAAAATAATAAAACGTTGGAAGAGTATCAGAAAGAGTTAATGTGCTGTAGAGCTGGGCAGCGCGAAGACCGTGGTCTTAAAATGGAAGATAGGGTCCGTGAGCCTAGAGCATTGACTAGGTGTGATTGTAAGGCCAGATTTCATGTTCGTGTCAATCGGTTTAGTGGTAGGTGGTTGTGTATTTGTTTCGAAGATGAACACAACCATGATCGTCTCGGTGCATTGCATTGCAGCATGCTTCCGGTTTACAGAAAAATGTCTGAGAGTGATGTGGTTCAAATGAACAACATGATGAAAGTTTGTATTCGACCACCAAATATATTTAACACGTTTGCTAACCAGTCTGGGGGTTATGAGAAGATAGGGTTTCGGAAGAAAGACATGTATAACAAGATTAGTGAGCAAAGGCGGAGTTCTTGTTCCGATGCTAAAGGAGCTTTGGAATACCTAGATTTCACCAAAGGATTTGAGGATTGCATGCTTGGTTATTATGATATGGGTACGTTCAGAAGAAAGTGGTTGGAACTGATTGCAAAATGTGAACTTCAAGAGAACACATGGGTGGCTGCTTTATATGAGAAGAGGAATATGTGGGCTACTGCTTACCTTCGTGGGAAATTTTTTGGTGGTTTTAGAACTACGTCACGGTGTGAGGGATTGCATTCAGAACTTGGAAAATTTGTCAACTCACGTTACAATTTGAGTGACTTCTTGCAACATTTTCAGCGGTGCCTGAATCACATGCGTTTCAAAGAGAAGGAGGATGACTTTACATCAATTCATGGTGAGCCCATGATACAAACAGAGTTACAAGGAATGGAACTATCAGCAGCCAATGTCTATACGAGAAGAGTTTTTTTCTTATTTAGGCGAGTGCTGATGAGGGCACAGAATTTGAGTGTAAGTGGTATTTCACAGGCTCTTCGGTGTACCATTTTTTTAGTAGTCAGTGAAACTGGAAGGAGTGGGGAATGGAGGGTATGTTTGTATGACAATAGCAAGGAAATAAAATGTGCATGTCTCAGGATGGAATCTAGAGGGCTACCATGTGAGCATATAGTTTGTGTCTTGGCTCATCTAGGGATTGATGAGATCCCTGAAATATTGGTCCTTAAAAGGTGGAGCAAGGCTGCTAAGGATGGGCTAGGTTGTAAAGAATTTGAAGCAAATCATTGTGTGGACGTTGGCCGTAGGGCTAGGAAGGCTGCACTGGATGGTTTATATGACCATGTTAGTGATTTTAAGTCTGCAAGCATTGAAATGTTTAAGGCTGAACGGGACAGACTTGTCGAGGATTGGAGGCAATGTCGGGCTGATTTTGAAAGCGAACAAAATCTGGGATTAGGTGGTCCTACTTACACACACGATGGTCCAAGGAACCCAACACGTGCTTCAACCAAAGGTCATGCTGGTACTTCCACATCTGCAGGCATCAGAACTAGGAAAAAACAAAATTGTTCCATATGTAAGCTACCAGGTCACAACAAAGTCACTTGTCCTAGTAGTAACCAACCTTGGCATTATTCTCATCTTCACAGCGCTGGTGGCTCCTCACAACAGAATGCTGCTGATGCTCAAACTGCTGAAGAATATGACTACTTTGACCCTGAATCTTGGCTGTGA 2097 0.4206 MRGLHLGSKGPVVGKETDNVQQGSCPFVLEDDGEGVYVVDENWGNSCAVEGVEHTGGPNLSDNNGATGEGYYCDGENGGVFLVGEDWNDENLEVDGDNGGGDKILVDTNDDILKMGDLSFFSPHEIERYEFGSVDIAYKFYFEYGFANGFGIRKGRSLKNNKTLEEYQKELMCCRAGQREDRGLKMEDRVREPRALTRCDCKARFHVRVNRFSGRWLCICFEDEHNHDRLGALHCSMLPVYRKMSESDVVQMNNMMKVCIRPPNIFNTFANQSGGYEKIGFRKKDMYNKISEQRRSSCSDAKGALEYLDFTKGFEDCMLGYYDMGTFRRKWLELIAKCELQENTWVAALYEKRNMWATAYLRGKFFGGFRTTSRCEGLHSELGKFVNSRYNLSDFLQHFQRCLNHMRFKEKEDDFTSIHGEPMIQTELQGMELSAANVYTRRVFFLFRRVLMRAQNLSVSGISQALRCTIFLVVSETGRSGEWRVCLYDNSKEIKCACLRMESRGLPCEHIVCVLAHLGIDEIPEILVLKRWSKAAKDGLGCKEFEANHCVDVGRRARKAALDGLYDHVSDFKSASIEMFKAERDRLVEDWRQCRADFESEQNLGLGGPTYTHDGPRNPTRASTKGHAGTSTSAGIRTRKKQNCSICKLPGHNKVTCPSSNQPWHYSHLHSAGGSSQQNAADAQTAEEYDYFDPESWL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi479g00035 698 PANTHER OS01G0519700 PROTEIN 129 308 - -
Sebi479g00035 698 MobiDBLite consensus disorder prediction 616 637 - -
Sebi479g00035 698 SMART 26again6 494 521 IPR006564 GO:0008270
Sebi479g00035 698 MobiDBLite consensus disorder prediction 602 637 - -
Sebi479g00035 698 ProSiteProfiles Zinc finger SWIM-type profile. 483 519 IPR007527 GO:0008270
Sebi479g00035 698 Pfam FAR1 DNA-binding domain 139 228 IPR004330 -
Sebi479g00035 698 MobiDBLite consensus disorder prediction 668 698 - -
Sebi479g00035 698 MobiDBLite consensus disorder prediction 668 684 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi479g00035 Sebi-Chr479 369294 371928 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi479g00035 FAR1 6.4e-17 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi479g00035 - - tpra:123913749 292.737