Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi478g00020 ATGGCGTCACACTCACAGTACCCACCCGACTTAGATTCCGACTCCGTTGCTTCCTCCCCTCGCTCCGACCACTTCCACGACGCGCCGCCACGTGTTCGATTCATGTGCAGCTTCGGCGGAAAGATCCTCCCCCGCCCCCACGACAACCAGCTCCGTTACGTCGGCGGCGACACCCGAATCGTCGCCGTCAACCGCTCCATCTCCTTCTCCGCTCTCATCCTCAAGCTCTGTAAACTCTCAGGCATGAGTAATATAACTGCCAAGTACCAGCTTCCCAACGAGGATCTCGACGCGTTGATCTCTGTTACGACGGACGAAGACGTGGAGAACATGATGGACGAGTACGACCGCGTCGCACAGAATCATAACCCGCGATCGGCTCGGCTTCGGCTCTTCCTCTTCCCCGAAGGAGAAGATTCTAGAGCCAGCAGCATCAGCTCGCTACTTAACGGCTCAACCAACCGCGAGAATTGGTTCCTCGATGCCTTAAACGGCGGCGTTTCAGGACTCGAACGAGGCCGCTCCGAAGCGTCTTCTATGGTTTCGGAAGTACCCGATTACCTCTTCGGGTTGGATAACTCCGAAGAAACACAATCCCAAAGTCACCACCACCGCGAGCCTCGACCAAAGGAACGACTCGTTCTCCAAGATAACGTTTCCGTTTCGGATCCGGGGCCAGGGGTCAGGCATGTGACCCCGATGCACCCATATAGTCCGTCGCCGGCGGTGGTTCATGACGGTTTGAAACAACAGGTGTATCAAGCCGTGCCGAATTCCGGTTCTGTTCCGGTTTACCCGGCGATGGCGATGACAGGTGGGGATGAATCGCAGAGAGGCGGAGCGGAATTTGGGTCGGGTCGGGGCACCAACTCGTTGAATAACTGA 885 0.5695 MASHSQYPPDLDSDSVASSPRSDHFHDAPPRVRFMCSFGGKILPRPHDNQLRYVGGDTRIVAVNRSISFSALILKLCKLSGMSNITAKYQLPNEDLDALISVTTDEDVENMMDEYDRVAQNHNPRSARLRLFLFPEGEDSRASSISSLLNGSTNRENWFLDALNGGVSGLERGRSEASSMVSEVPDYLFGLDNSEETQSQSHHHREPRPKERLVLQDNVSVSDPGPGVRHVTPMHPYSPSPAVVHDGLKQQVYQAVPNSGSVPVYPAMAMTGGDESQRGGAEFGSGRGTNSLNN 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi478g00020 294 PANTHER OS05G0427100 PROTEIN-RELATED 14 261 - -
Sebi478g00020 294 MobiDBLite consensus disorder prediction 271 294 - -
Sebi478g00020 294 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 51 136 - -
Sebi478g00020 294 SUPERFAMILY CAD & PB1 domains 47 143 - -
Sebi478g00020 294 MobiDBLite consensus disorder prediction 1 16 - -
Sebi478g00020 294 CDD PB1_UP2 35 134 - -
Sebi478g00020 294 MobiDBLite consensus disorder prediction 1 28 - -
Sebi478g00020 294 SMART PB1_new 46 136 IPR000270 GO:0005515
Sebi478g00020 294 Pfam PB1 domain 47 135 IPR000270 GO:0005515
Sebi478g00020 294 Gene3D - 52 135 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi478g00020 Sebi-Chr478 484863 486252 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi478g00020 27 169 MAP Kinase Kinase Kinase AT5G57610 46.897 1.79e-31 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi478g00020 - - gmx:100803004 404.445