Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi477g00018 ATGGCTCCCACAGCCAAAGGTACATGGCCAATACTCGGTCACTTACCACTCTTTATCGGTGCACCAACACCCCATAAAACCTTGGGTACCAAGGCTGACAAGCATGGATCCTTATTCACCTTAAAGCTTGGTGGCACACGTGCTGTGGTACTTAGCAACTGGGAAATGGTCAAGGAATGCTTCACCATAAACGACATGGTCGTTTCCTCTCGCCCCCAACTTATTGCAAGTGAACACATGACCTACAACGGAGCTGCGTTTGGCCTTGCACCTTATGGTCCCTATTGGCGCCAACTACGTAAGATTGTGAATTTAGAGATCCTTACTAATAGCCGCGTCGAGCAATTTCGCCTTGCTCGTGTTTCAGAAGTTGACACTTCGATTAAAGAGCTCTTCAATGTTTGGTCCAACAAAAAGAACGAGTTTGGCTATGTGTTAGTGGAATTGAAGCAATGGTTTAGTCAATTGACGTTCAACATGATTCTAAGAATGGGCATTGGGAAGAGATATTTTGGTGCTACAAATGTGGTTGATGAGAAAGAAGCGCAGAGATGTATAAAAGCTTTAAAGGAGTTCATGCGTTTGATGGGTGTATTCACAGTGGCAGATGCTATTCCTTGTTTGAGATGGCTTGATTTTGGTGGCCATGAGAAGGCCATGAAAGAAACTGCCAAGGAATTGGATAAAATTTTAGATGAATGGTTAGAGGAGCACCGGCGTAACAGGGCTTTGGATGAAAAGGTTGAATGTGATCAAGACTTCATGGATGTGATGCTTTCATTACTTGAAGGAACAACTATTGATGGGTTTGATGCTGATACCATAATCAAAGCCACGATATTGACACTAATGTCGGCAGGAACTAACACAACTGGCGTAACTCTTACATGGGCAATATGTTTGTTATTAAGAAATCCACTTATATTGGAAAAAGCAAAGGAAGAACTTGACACTCATGTTGGGAAAGAGAGATGCGTAAGCGAATCAGATATAAATAACTTGGTATATCTTCAAGCCATAGTCAAAGAAACACTAAGATTGTATCCACCAGGCCCTCTCTCAGGACCTCGTGAATTCACCAAGAATTGCACTTTAAGTGGCTACAATATTAAAAAGGGAACCCGATTAATTGTGAATCTTTGGAAAATTCACAGAGATCCTAGTGTTTGGACAGATCCATTGGAGTTCAAGCCAGAAAGGTTCCTTACCACTCATAAAAATACAGATGTTAGGGGTTGTCATTTTCAACTATTACCATTTGGATGTGGGAGGAGGATTTGTCCGGGAATATCCTTTGGCCTTCAAATGATTCATTTAACTCTGGCTAGTTTTTTGCATTCCTTTGAAATGTTAAACCCTTCACCTGAGCTTGTTGATATGACTGAAATTTTTGGATTAACCAATGCCAAAGCTACTTCGCTTGAGATTCTTCTTAAACCACGTTTGTCTCCCAATTGTTATTAA 1464 0.4119 MAPTAKGTWPILGHLPLFIGAPTPHKTLGTKADKHGSLFTLKLGGTRAVVLSNWEMVKECFTINDMVVSSRPQLIASEHMTYNGAAFGLAPYGPYWRQLRKIVNLEILTNSRVEQFRLARVSEVDTSIKELFNVWSNKKNEFGYVLVELKQWFSQLTFNMILRMGIGKRYFGATNVVDEKEAQRCIKALKEFMRLMGVFTVADAIPCLRWLDFGGHEKAMKETAKELDKILDEWLEEHRRNRALDEKVECDQDFMDVMLSLLEGTTIDGFDADTIIKATILTLMSAGTNTTGVTLTWAICLLLRNPLILEKAKEELDTHVGKERCVSESDINNLVYLQAIVKETLRLYPPGPLSGPREFTKNCTLSGYNIKKGTRLIVNLWKIHRDPSVWTDPLEFKPERFLTTHKNTDVRGCHFQLLPFGCGRRICPGISFGLQMIHLTLASFLHSFEMLNPSPELVDMTEIFGLTNAKATSLEILLKPRLSPNCY 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi477g00018 487 CDD CYP82 36 481 - -
Sebi477g00018 487 PRINTS E-class P450 group I signature 56 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 295 321 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 379 403 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 32 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 338 356 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 156 174 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS E-class P450 group I signature 275 292 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PANTHER CYTOCHROME P450 82C3-RELATED 2 487 - -
Sebi477g00018 487 SUPERFAMILY Cytochrome P450 8 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Sebi477g00018 487 FunFam Cytochrome P450 82C4 1 479 - -
Sebi477g00018 487 Pfam Cytochrome P450 7 457 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 Coils Coil 217 237 - -
Sebi477g00018 487 Gene3D Cytochrome P450 1 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS P450 superfamily signature 339 350 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS P450 superfamily signature 286 303 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Sebi477g00018 487 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi477g00018 Sebi-Chr477 443365 446458 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi477g00018 2 487 Cytochrome P450 AT4G31940 50.101 3.40e-177 506
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi477g00018 - - gmx:100805047 730.709