Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi476g00073 | ATGGCCACCACGCAAGCTAGTGGTGGCAGCGGCGGCGGCGTTGCCATAATGCCAGGCACTGTAACCTCCACGGATCCTTCCACTTCGAGCACTTGCTCCAACACCTCCCTCCTCCTCCAATCGCCGATTCTCATATTCTCTCTGTTCCACAAAGCCATTAACTCTGAGCTCCAGTCCCTTCACCAAGCCGCCTTGGATTTCGTTTCCAACCACGATGATCCCTCTGACCTAAAATCCTTGTCCCACCGCTGTCACTTTCTTCGCACCATCTATAAGCACCACTGTAATGCCGAGGACCAGGTCATATTTCCTGCCTTAGATAAACGTGTGAAGAATGTTGCAAGCGCGTATTTTTTGGAACATGAGGGGGAGGGTCTTCTTTTCAATCAGTTGTTCGAGCTGCTAAATTCCAATTTGCTAAATGAAGAGAGCTATCGAAGAGAATTAGCTTCTTGTACTGGAGCCCTTCGAACATCAATTAGCCAGCATATGTTTAAGGAAGAGGAACAGGTCTTCCCTTTGGTCATTGAGAAATTTTCATCTGAAGAGCAGGCATCATTAGTATGGCAATTTCTTTGTAGCATACCAGTTAAAATGATGGCAGAATTTCTTCCCTGGCTTGCTTCATATATATCATCTGATGAGCATCAGGAACTACTTAGGTGCTTGTGCACTATTATTCCCAAAGAGAAGCTCCTTCATCAGGCTATAAAGCAAGAATTGAGTGATTTAGCTGAGACAGCTAGGAAGATGGACCTATCTGAAGAATTTTCTGACTTGTCTTCATTTAATGGGAGGCTTCAATTTATAACTGAAGTCTGCATCTTTCATAGGTGTATATTTACCCTGTCTGTCCATATTTTTGCCCTTAATTCTGGCAAAGTGCATTATGTGGGTGCCTTTTTGCATCATATTAAGGGTCTTGGACCACGTAGAAGGAGAATCAGTGATCAGAAATGTGAGCGAGTGTGCGCGTTCTTGCATGTGAGTCAGAGAGAGATAGAGAGAGTTGCATGTGTGTATGTAAGTCAATACATCCATGCTTATGAATCGGACATTGCATATATGTTGAGCTCCCATACTGAACAAATAATGAAAACCGTACTGAAGCACTTTGAAAATGAGGAAGCTCAGGTTCTTCCACTTGCACGAAAGCTATTTAGCCACCAAAGGCAACGAGAATTACTTTATGAAAGCTTGTGCTTGATGCCCTTGAAATTGATCGAAAGCGTATTACCATGGCTAGTAGGATCACTTAGTGAAACAGAAGTTAGGTCGTTTCTTCAGAATATGTATATGGCAGGTTTATGTCCTGCCAGGAGATTGATGGAGACGGAAAGCACTAGCCTATCATTTTGCATGTGTGAACCTTCATTCAGTCCCAATGAAAAATCTTCGCACGTTAAACAAGATGATGCAAATAGCGACATTGGACCAGTCAAGCATGGAAATCCAGAACCAAAGCAAGACAATGATGCTTCTAACTTGATGGTAACAAGAGAAACTCTTAACTCACCTAATAATCAGTCTTGCTGTGTCCCTGGATTAGGGGTGAACAGAAATCATCTAGGAGGTGGTTCTTTTTCCCTAACAAAGTCTCTGCGAGCCTTATCTGATTGTCCATCTGCACCTTTCCTCAATTCCAGTCTTTTTATGTGGGAAACTGATGTAGTCTCTGTTGACAATCAATTTACAACAAGGCCTATTGATAACATATTTAAATTTCACAAAGCCATCCGTAAAGACTTGGAATATTTAGATGTTGAATCCGGAAAACTTAATGATTGTGATGATATTTTCATTCAGCAATTCACTGGTAGATTGTGCTTGTTGTGGGGTTTGTATAGAGCTCATAGTAATGCAGAAGATGATATAGTATTTCCAGAATTAGAGTCAAAAGAGAATCTTCACAATGTGAGTCATTCTTACACTTTGGACCACCAGCAGGAAGATAAGTTATTTTTGGATATTTCTTCTGGACTCACTCAGCTTACTCGATTACATGAATTACTAAATAAAAGGATTTCGTCTGACCATCTAACCAACTGTTACTCTAATTATTCTGATTGCTCTGATACCATACAAAATTACAACGAGCTCTCTACAAAGATTCAGGGCATGTGCAAGTCTATCAGAGTGACACTAGATCAGCATCTTCTTAGGGAGGAACTTGAATTATGGCCCTTGTTTGATAAACACTTTTCTGTGGAAGAACAAGATAAGATTGTTGGTCGTATAATTGGTACTACAGGGGCAGAGGTTCTCCAATCAATGTTGCCATGGGCTACGAAAAACACTATGTTCAATGAGTGGCTTAATGAATGGTGGGAAGGACCTGCTTCATCTTTAAATATCACTACACCTCGAGACCATTCACCAGTGAAGTTAGAGCTTAAACTTAATAACTCCAATTATTTGAATGCAAGAGTATGGGATCCCTGTCTAATGTACTCATATTCAGGTGCTGATGCCTATGAAGACTCAGAGCATAGCTTTCAAGCCTTCAGGCCTGGATGGAAAGATATATTCAGGATGAACCAGAATGAACTTGAATCAGAAATAAGAAAAGTTTCTCGAGATTCAACTCTTGATCCAAGAAAAACATATCTAATTCAAAATCTAATGACCAGTCGCTGGATAGCTTCTCAGCAGAAGTCATCTCAAGCAACAGGAGGTGAATCTTCTAAAGGAAAAGATTTGTTGGAAACTTCTCCTTCATTTCGTGATCCAGAGAAAAAATCCTTTGGTTGCGAACATTACAAAAGAAATTGTAAACTCCGTGCTGCCTGCTGTGGAAAGCTATTCACCTGTAGGTTCTGCCATGACAAAGTTAGTGACCATTCAATGGATAGGAAGGCTACGACTGAGATGAGTGCATGCGCTGCCTTCAAACAGCCTGTCGGACCAGTTTGTGTAACACCTTCCTGTGGTCGTCTCTTAATGGCAAA | 2948 | 0.4118 | MATTQASGGSGGGVAIMPGTVTSTDPSTSSTCSNTSLLLQSPILIFSLFHKAINSELQSLHQAALDFVSNHDDPSDLKSLSHRCHFLRTIYKHHCNAEDQVIFPALDKRVKNVASAYFLEHEGEGLLFNQLFELLNSNLLNEESYRRELASCTGALRTSISQHMFKEEEQVFPLVIEKFSSEEQASLVWQFLCSIPVKMMAEFLPWLASYISSDEHQELLRCLCTIIPKEKLLHQAIKQELSDLAETARKMDLSEEFSDLSSFNGRLQFITEVCIFHRCIFTLSVHIFALNSGKVHYVGAFLHHIKGLGPRRRRISDQKCERVCAFLHVSQREIERVACVYVSQYIHAYESDIAYMLSSHTEQIMKTVLKHFENEEAQVLPLARKLFSHQRQRELLYESLCLMPLKLIESVLPWLVGSLSETEVRSFLQNMYMAGLCPARRLMETESTSLSFCMCEPSFSPNEKSSHVKQDDANSDIGPVKHGNPEPKQDNDASNLMVTRETLNSPNNQSCCVPGLGVNRNHLGGGSFSLTKSLRALSDCPSAPFLNSSLFMWETDVVSVDNQFTTRPIDNIFKFHKAIRKDLEYLDVESGKLNDCDDIFIQQFTGRLCLLWGLYRAHSNAEDDIVFPELESKENLHNVSHSYTLDHQQEDKLFLDISSGLTQLTRLHELLNKRISSDHLTNCYSNYSDCSDTIQNYNELSTKIQGMCKSIRVTLDQHLLREELELWPLFDKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWATKNTMFNEWLNEWWEGPASSLNITTPRDHSPVKLELKLNNSNYLNARVWDPCLMYSYSGADAYEDSEHSFQAFRPGWKDIFRMNQNELESEIRKVSRDSTLDPRKTYLIQNLMTSRWIASQQKSSQATGGESSKGKDLLETSPSFRDPEKKSFGCEHYKRNCKLRAACCGKLFTCRFCHDKVSDHSMDRKATTEMSACAAFKQPVGPVCVTPSCGRLLMA | 982 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi476g00073 | 982 | MobiDBLite | consensus disorder prediction | 461 | 493 | - | - | |
Sebi476g00073 | 982 | MobiDBLite | consensus disorder prediction | 882 | 901 | - | - | |
Sebi476g00073 | 982 | Pfam | CHY zinc finger | 917 | 973 | IPR008913 | GO:0008270 | |
Sebi476g00073 | 982 | Gene3D | nmb1532 protein domain like | 41 | 193 | - | - | |
Sebi476g00073 | 982 | Pfam | Hemerythrin HHE cation binding domain | 568 | 728 | IPR012312 | - | |
Sebi476g00073 | 982 | Pfam | Hemerythrin HHE cation binding domain | 46 | 175 | IPR012312 | - | |
Sebi476g00073 | 982 | SUPERFAMILY | ARM repeat | 49 | 396 | IPR016024 | - | |
Sebi476g00073 | 982 | CDD | Hr-like | 45 | 173 | - | - | |
Sebi476g00073 | 982 | Gene3D | nmb1532 protein domain like | 564 | 765 | - | - | |
Sebi476g00073 | 982 | CDD | Hr-like | 572 | 728 | - | - | |
Sebi476g00073 | 982 | MobiDBLite | consensus disorder prediction | 882 | 911 | - | - | |
Sebi476g00073 | 982 | SUPERFAMILY | CHY zinc finger-like | 910 | 961 | IPR037274 | GO:0008270 | |
Sebi476g00073 | 982 | ProSiteProfiles | Zinc finger CHY-type profile. | 910 | 978 | IPR008913 | GO:0008270 | |
Sebi476g00073 | 982 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Sebi476g00073 | 982 | FunFam | Zinc finger protein BRUTUS | 563 | 774 | - | - | |
Sebi476g00073 | 982 | PANTHER | RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 | 611 | 975 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi476g00073 | Sebi-Chr476 | 800505 | 808031 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi476g00073 | 231 | 982 | C2H2 Transcription Factor Family | AT3G18290 | 48.526 | 0.0 | 677 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi476g00073 | K16276 | - | cit:102626254 | 1017.68 |