Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi476g00071 ATGGCCTTCAAAACCGATTCCGACACTAACAACAAACTCACCACATGGAACTCCACCACCCACCCATGCACCTGGCACGGTGTCTCCTGTCTCAGGAACCGCGTCTCTCGCCTTGTCCTCCAAGACCTCGACCTCCACGGCTCCATCCAACCCTTAACCTCTCTCACTAACCTCCGACTCCTCAGCCTTAAACGCAACCGTTTTAACGGTCCCATTCCCAACCTCTCCAATCTCACCGCCTTAAGGCTCCTCTTCCTCTCTCACAACAACTTCTCCGGCGAGTTCCCCTCATCGCTCACGTCCCTCACCCGCCTCTACCGTCTCGATCTGTCCCACAACAACCTCTCCGGCGAGATTCCGGCCACGGTCAACCGTTTGACCCACCTTCTCACTCTCCGCGTTGACCAGAACCAAATCCAAGGCCACATTCCGGACTTAAACCTCTCTTATCTTCAAGACTTCAACGTCTCCGGTAACCACCTATCGGGTCGAATACCGGAAACCCTCTCGGGTTTTCCCGGATCCGCTTTCGAGCAAAACCCGTCTCTCTGTGGAGCCCCATTGCAGAAATGCAAAGACGTCCCTGCACTTGCTACACCATTGGTTCCTACCCCAGCAACAACAACTGTGCCATCTTCTCCGAGTTCAATGCCGGAAAACGAATCGGTACCCGGAAACAAGACCCGAAAAAACGGAGCTCCGAAAATGGGGCCGGTGGTTTTAATCGCGATTGTCCTCGGCGATGTTTCAGTGCTCGCCGTGGTTTCAGTGCTTCTCTACTGCTACTTCTGGCGAAACTACAATGCTGAGTTCAGGGAAGTGAAAGCAGGGTCGTCGAATTCAAAGCGTGTGGAGGGTGAAAAGATGGTTTATACTTCGAGTGTTTCTGCTGGGCAACAGGGTTTGGAGAAGGGTAGAATGGTGTTCTTTGAAGGGGTGAAGAGGTTTGAGCTAGAGGACTTGTTGCGTGCCTCTGCGGAAATGCTGGGGAAGGGTGGGTTTGGCACAGCTTACAAGGCTGTTCTTGATGATGGAACAGTTGTTGCTGTGAAGAGGCTCAAGGAGGTTCAAATTGGAGGGAAGAGGGAGTTTGAGCAGCGAATGGAAATGCTGGGAAGGTTAAGAAACCCCAACATTGTTAGCTTAAGAGCTTACTATTTTGCAAGGGATGAGAAATTGCTTGTCTGTGATTACATGCCTAATGGTAGCTTGTTCTGGCTCCTTCACGGTAGCCGAGGACCCGGGAGAACCCCACTGGACTGGACCACGAGGCTGAAAATAGCAGCTGGAGCGGCACGAGGTGTGGCTTTCATTCACAACTCGTGCAAGTCCCATAACCATAATAATAATATCACCCACGGTAACATCAAATCCACAAACATACTCGTTGACGTGGCGGGAAATGCACGCGTGGCGGATTTTGGGCTCTCCATCTTCGCGGGCCCATCAAGCGGAAGATCCAATGGCTACCGCGCTCCGGAGGTATCGGACGGTCGAAAACAGTCCCAGAAGGCTGATGTGTACTCCTTTGGCGTTCTTCTCATGGAGATGCTGACGGGGAAGTGCCCATCCGCCGTGGACGGCGGCGGCACGGCGGTGGACCTCCCTAGGTGGGTCCAGTCTGTGGTGAGGGAGGAATGGACCGCTGAGGTGTTTGATCTTGAGCTGATGAGGTACAAGGATATTGAGGAGGAAATGGTGGCGCTGCTTCAGATAGCTATGGCGTGCACTGCGACTGCACCTGATCAACGGCCCAGGATGAGCCACGTGGTCAAGATGATAGAGGAGTTGCGTGGGGTCCAAGTGTCACCGTGTCATGACACGTTGGACTCGGTGTCTGAGTCACCTTCCGTGTCTGAAGATGCACGTGGAGGTGGAGCTAGCGTTTCTACCGACTAG 1899 0.5345 MAFKTDSDTNNKLTTWNSTTHPCTWHGVSCLRNRVSRLVLQDLDLHGSIQPLTSLTNLRLLSLKRNRFNGPIPNLSNLTALRLLFLSHNNFSGEFPSSLTSLTRLYRLDLSHNNLSGEIPATVNRLTHLLTLRVDQNQIQGHIPDLNLSYLQDFNVSGNHLSGRIPETLSGFPGSAFEQNPSLCGAPLQKCKDVPALATPLVPTPATTTVPSSPSSMPENESVPGNKTRKNGAPKMGPVVLIAIVLGDVSVLAVVSVLLYCYFWRNYNAEFREVKAGSSNSKRVEGEKMVYTSSVSAGQQGLEKGRMVFFEGVKRFELEDLLRASAEMLGKGGFGTAYKAVLDDGTVVAVKRLKEVQIGGKREFEQRMEMLGRLRNPNIVSLRAYYFARDEKLLVCDYMPNGSLFWLLHGSRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSHNHNNNITHGNIKSTNILVDVAGNARVADFGLSIFAGPSSGRSNGYRAPEVSDGRKQSQKADVYSFGVLLMEMLTGKCPSAVDGGGTAVDLPRWVQSVVREEWTAEVFDLELMRYKDIEEEMVALLQIAMACTATAPDQRPRMSHVVKMIEELRGVQVSPCHDTLDSVSESPSVSEDARGGGASVSTD 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi476g00071 632 CDD STKc_IRAK 329 597 - -
Sebi476g00071 632 Gene3D Ribonuclease Inhibitor 53 195 IPR032675 -
Sebi476g00071 632 MobiDBLite consensus disorder prediction 203 227 - -
Sebi476g00071 632 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 604 - -
Sebi476g00071 632 Gene3D Ribonuclease Inhibitor 1 52 IPR032675 -
Sebi476g00071 632 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Sebi476g00071 632 MobiDBLite consensus disorder prediction 203 231 - -
Sebi476g00071 632 ProSiteProfiles Protein kinase domain profile. 323 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi476g00071 632 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 599 IPR046959 -
Sebi476g00071 632 Pfam Protein kinase domain 327 592 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi476g00071 632 MobiDBLite consensus disorder prediction 605 632 - -
Sebi476g00071 632 FunFam pollen receptor-like kinase 1 293 398 - -
Sebi476g00071 632 FunFam Nuclear pore complex protein NUP107 1 145 - -
Sebi476g00071 632 SUPERFAMILY Protein kinase-like (PK-like) 327 594 IPR011009 -
Sebi476g00071 632 MobiDBLite consensus disorder prediction 606 632 - -
Sebi476g00071 632 Pfam Leucine rich repeat N-terminal domain 4 30 IPR013210 -
Sebi476g00071 632 Gene3D Transferase(Phosphotransferase) domain 1 399 612 - -
Sebi476g00071 632 Gene3D Phosphorylase Kinase; domain 1 292 398 - -
Sebi476g00071 632 SUPERFAMILY L domain-like 11 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi476g00071 Sebi-Chr476 755522 758201 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi476g00071 1 628 Receptor kinase-like Gene Family AT1G68400 63.411 0.0 774
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Sebi476g00071 Pkinase 3.7e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi476g00071 - - cam:105851082 858.596