Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi476g00068 ATGATGGTTCCAGCTCATGTATTTTGCACCCTCTTGTTTTCTACCTTTGTGCAGCTTGTCTCCACTGCAAATGCCAAGTGTCCACCTTCGTTTGATTGTGGGAACCTTGGCAAGATCCATTTTCCTTTCACTGATGCAGAGCACCCTGAGTGTGGCTTGTTGGCAATACATGGTTGTAATGACCGTTACCCTGACGCAGTTAAAACCATTAGGAACCAAGGAACATGGTTTTATGTTGTCGAACTAGACCAGTTTACCATTGTCGTTAGAGATGATGATCTCCATTCCCTTTTGTTATCAAGAAGATGTGGTGTCTTCAATAAGAACTACACTTTTGATACCACTTCTCCTTTCTTTTCCCTTCACTTCTTAAAAGTCACTCTTTTCAGCTGCAACAGCACCCTCAATGTCACCCCACCTGCAACCATTTCAAAATCTACTATATGCTCAAATGACATCTTCTATGATGCAGCTACTATGGAAGATGAATTCCTAAGTTCCAAGGACTATAATCTGTATTTTGCATCATGTTCAATGGTTCAGCTTCCAATAAGAGACACAGGTCTCAAGCCTGATCCCAAAGGAGATCTCTTTGATTTTATATCAGCTGACATTCCTATCCAAATTCAGATATCCCCTGCTTGTTCTTCGTGTTACTATCTCAGAGGAGGCCAGTGTCAACTTGACAACCAAGGGAAGTTCTTTTGTGCCCAAGAAAAAACGGGTAAAAAGATGAAGAAAGTGGTAGCAGCTGCTTCAGTTGCTGGAGCACTTGGAGTTTTGATGGTCTTGGCTTGCATCATACGAAGATATTATTGGCACAGGGAAAATCCCACCTACCGAATGATTGAGGCTTTCCTGAAGCAACATGGACACCTTTCAGCCAAAAGGTACAGCTATTTGGAGGTAAAAAAAATGACCAACAAATTCAAAAACAAATTAGGCCAAGGAGGATATGGCAGTGTATACAAAGGGAGGTTACATAATGGAAGTCTTGTGGCAGTGAAGATTTTAAGTAAATTACAAGGTAATGGAGAAGAATTCATTAATGAAGTTGCTAGTATTAGCATGACTTCTCATGTTAACATTGTCAATTTACTGGGATTTTGTTTGGAAGGATCTAAAAGAGTTCTCATATATGAGTACATGCCTAATGGATCTCTTGAGAAGTTCATATATGAAGAGAGAGATCCTTTAAGGCTTAATCTGACATTGAATTGCACAACTATGTACAATATTGCTATTGGTGTTGCTCGAGGATTGGAGTATTTGCACAAAGGTTGCAACACTAAAATTGTGCATTTTGACATAAAACCTCACAACATACTGCTAGATGAGTTGTTTTGCCCAAAAATATCAGATTTTGGGCTTGCTAAAATATGCCCAAAAGAAAAAAGTACTCTATCAATGATGGTTGCAAGGGGAACTGTAGGGTATATTGCTCCTGAGGTGTTCTGCAGAAATTTTGGTGGAGTGTCTCATAAATCAGATGTCTACAGTTATGGAATGATGGTTTTTGAAATGCTTGGCACAGGAGAGAATATTAATGACAGAGCTGAATTTTCAAGTGATAAATACTTTCCACATTGGATTTACAACCATCTTGAATTGAATCAAGAGCTTCAATTGCGATGTATTAAAAACCAAAATGATATAGAGATGGTGAGAAAAATGATAATAGTGAGTTTGTGGTGCATACAGGCTGACCCTTCCAATCGACCCACAATGAGTAGAGTGGTGGAAATGATGGAAGGAAGCATTAACTCATTGCAAGTACCACCTAAACCTTTCTATTCTCTATTCTCTTCATCTTCATTCCTTGAATCTCAAACAAGTGAGACTTCATAG 1848 0.3896 MMVPAHVFCTLLFSTFVQLVSTANAKCPPSFDCGNLGKIHFPFTDAEHPECGLLAIHGCNDRYPDAVKTIRNQGTWFYVVELDQFTIVVRDDDLHSLLLSRRCGVFNKNYTFDTTSPFFSLHFLKVTLFSCNSTLNVTPPATISKSTICSNDIFYDAATMEDEFLSSKDYNLYFASCSMVQLPIRDTGLKPDPKGDLFDFISADIPIQIQISPACSSCYYLRGGQCQLDNQGKFFCAQEKTGKKMKKVVAAASVAGALGVLMVLACIIRRYYWHRENPTYRMIEAFLKQHGHLSAKRYSYLEVKKMTNKFKNKLGQGGYGSVYKGRLHNGSLVAVKILSKLQGNGEEFINEVASISMTSHVNIVNLLGFCLEGSKRVLIYEYMPNGSLEKFIYEERDPLRLNLTLNCTTMYNIAIGVARGLEYLHKGCNTKIVHFDIKPHNILLDELFCPKISDFGLAKICPKEKSTLSMMVARGTVGYIAPEVFCRNFGGVSHKSDVYSYGMMVFEMLGTGENINDRAEFSSDKYFPHWIYNHLELNQELQLRCIKNQNDIEMVRKMIIVSLWCIQADPSNRPTMSRVVEMMEGSINSLQVPPKPFYSLFSSSSFLESQTSETS 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi476g00068 615 ProSitePatterns Protein kinases ATP-binding region signature. 314 336 IPR017441 GO:0005524
Sebi476g00068 615 SUPERFAMILY Protein kinase-like (PK-like) 291 583 IPR011009 -
Sebi476g00068 615 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Sebi476g00068 615 ProSiteProfiles Protein kinase domain profile. 308 598 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi476g00068 615 Pfam Protein kinase domain 310 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi476g00068 615 Gene3D Transferase(Phosphotransferase) domain 1 383 592 - -
Sebi476g00068 615 Gene3D Phosphorylase Kinase; domain 1 284 382 - -
Sebi476g00068 615 PANTHER RUST RESISTANCE KINASE LR10-RELATED 280 605 IPR045874 GO:0004672
Sebi476g00068 615 SMART serkin_6 308 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi476g00068 615 FunFam serine/threonine-protein kinase PBS1-like 281 382 - -
Sebi476g00068 615 FunFam PR5-like receptor kinase 383 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi476g00068 Sebi-Chr476 724620 726820 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi476g00068 20 596 Receptor kinase-like Gene Family AT5G38260 38.796 2.61e-128 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Sebi476g00068 Pkinase 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi476g00068 - - gmx:100807312 903.664