Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi476g00061 ATGAAGCAGAGAATAACCATGAAACCCTTGTCCTCGTGTTCTCCCCTAATAATTCACTCATACTCATACACCACTCTCTTCCTTCTCCTAGCCACAACCGCTTTCTCTTCCGTGGACCCCAAGTACCAAGCTTGCGAGCCCAAGACCTGCGAAAAAGGCCCAAACATAAGCTACCCTTTCTACATCAAAGGAAAACAAGAACCCTTCTGTGGGTACCCTCGTTTTGGGCTCACTTGTGGCGAAAATGGCTTCCCAATTCTCAAAAGGGGGAATAATAGCCAATTCATCGTGCACGAGATTTTCTACAATAGCCAGTCACTTCGAGTCTCCATCCCCTTGTTCACCGATTGTGTTGCTCCAATGCGCAATCTCACCTCCGGTAGGAGGTTCAGCGTTGCTCCTAACCAAAAGGAAGTGTTGTTGTTCTACGGCTGCGACTTAACATCGCTTCCCAAAAGGATGCAGGAGAACACGATTGGGTGTTATGCAGGGAACAGAACGCGTTCGGTTGTGGCGTTGTATAGGGAGGACCGGAATTTGAGCATAGCAGCGAAGAATTGCGAGGGCAGAGTGGTGAATACGACGGTGGAAGGTGAGATTGAGAAAGGAGGGATTGAAGAGGCGCTGCAGAGAGGGTTTTTGTTGAATTGGACAGAGAGTTATTGTGGCGATTGCAGGAATAGTGGAGGGAGGTGCGGGTTCGACTTAGACAAACGCATATACGCTTTCAGGTGCTACTGTCCTGATAGAGTCGATACCACCAAATGTGATGTACCATCACCAATACAATCAGGAATATGGGACCCGAGCCACAAACGTCTACGATTGGATTTGCCATGA 840 0.4845 MKQRITMKPLSSCSPLIIHSYSYTTLFLLLATTAFSSVDPKYQACEPKTCEKGPNISYPFYIKGKQEPFCGYPRFGLTCGENGFPILKRGNNSQFIVHEIFYNSQSLRVSIPLFTDCVAPMRNLTSGRRFSVAPNQKEVLLFYGCDLTSLPKRMQENTIGCYAGNRTRSVVALYREDRNLSIAAKNCEGRVVNTTVEGEIEKGGIEEALQRGFLLNWTESYCGDCRNSGGRCGFDLDKRIYAFRCYCPDRVDTTKCDVPSPIQSGIWDPSHKRLRLDLP 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi476g00061 279 PANTHER OS01G0690200 PROTEIN 22 257 - -
Sebi476g00061 279 Pfam Wall-associated receptor kinase galacturonan-binding 45 110 IPR025287 GO:0030247
Sebi476g00061 279 Pfam Wall-associated receptor kinase C-terminal 178 249 IPR032872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi476g00061 Sebi-Chr476 679881 680875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi476g00061 43 234 C3H Transcription Factor Family AT2G46495 25.500 4.05e-10 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi476g00061 - - aip:107643858 260.381