Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi476g00020 ATGGCAGTAAGCATTACATCTTCTCACACTGTCATTCCCTCCCACACTACTCCAAATGATACTGTTTTACTGTCTGAGAGTGAACAAATCAATGCTCACAATCATGCATTCACCATCTACATCTATAGGCCAAATCACAACCCCACTTTCAAAATTATTGTGGACACAATCAGACACTCTCTTAGCAACATCTTAGTCCACTACTACCCTCTAGCTGGCAGGTTACACATCACAAGGGGTGGAAGATGGGAATTGGAGTGCAATGCAAAGGGTGTGAAGCTGTTGGAAGCTCAATCCACAAAAACACTTGATGAGTATGGTGACTTTGAACCTAATGACACCATCACAGAGCTTATTCCTAAGGTTGATTATAGTGAACCTTTGGAGAATTTACCACTGTTATTTGTGCAGTTAACAAAATTCACCTGTGGTGGTTTCTGTGTTGGCATTGCCATTTCCAATGTCTTAGTTGATGGAATTTCTGGCACTCTCTTTGTTGATGCATGGGCTAAGGTTGCTCGAGGTGGTACCTTGGAGGATTCTGAGATGCCACTTCTGAACAGAACAGTTCTGAGATCAGAGACAAACTTCAACATGGCATCACCATGCTTTCACCATCCAGAGTTCAAGCCATTGCCACTTGTCCTAGGCGACACTGATGCCATGGTGGAGCGTGAGAAAGAGACAACTCTTGCAATACTCAAACTCACAAAGGATATGGTGGAGAAGCTGAGGAAGAAAGCCAATGAGTTTATGGAAGATGACAATCAGAGTCTGGGGAAGAGGGGAAGAAGACCTTATAGCAGATATGAGAGCATTGGTGCTCATATATGGAGGTGTGCATGCAAGGCTCGCTTTGGTGATCACAATCAACCAACGGTGGTTTACATTGTTGCAGGTACCAGAAACAGATTGAAGCCACCTCTTCCTTCAAACTACTTTGGAAATGCCACACATCCAAGTGTAACACCAACATCCTTCAGTGGGGACATTGTGTCAAAGCCTTTGAGCTATGGGGCACAAAAGATTAGGGAAGCAATTGAAGTGTTAACAGATGAGTATTTGAGATCAGCGTTTGATTTTATTGGGAGTCAGAAAAATGTTGGGTGGCTAAGGCCATCCTTGAATAATGAAGGGATTGTGGAAGCCCCTTTTCTTGGGAATCCTAATCTTAACATATGGAGTTGGATAAGTAATATGCCAATGTATGGACCAGATTTTGGATGGGGAAAGCCTATATATATGGGCCCTGGTGCTGTGAAAGGAGATGGCAAGGCATTCATTATGCCAGGTCCATTAGATGATGGGTCTCTTTCCATAGCCATTCGTTTGCAAACTTCTCATATGGAAGTTTTCAAGGAGTACTTCTACAAGGACATATGA 1383 0.4309 MAVSITSSHTVIPSHTTPNDTVLLSESEQINAHNHAFTIYIYRPNHNPTFKIIVDTIRHSLSNILVHYYPLAGRLHITRGGRWELECNAKGVKLLEAQSTKTLDEYGDFEPNDTITELIPKVDYSEPLENLPLLFVQLTKFTCGGFCVGIAISNVLVDGISGTLFVDAWAKVARGGTLEDSEMPLLNRTVLRSETNFNMASPCFHHPEFKPLPLVLGDTDAMVEREKETTLAILKLTKDMVEKLRKKANEFMEDDNQSLGKRGRRPYSRYESIGAHIWRCACKARFGDHNQPTVVYIVAGTRNRLKPPLPSNYFGNATHPSVTPTSFSGDIVSKPLSYGAQKIREAIEVLTDEYLRSAFDFIGSQKNVGWLRPSLNNEGIVEAPFLGNPNLNIWSWISNMPMYGPDFGWGKPIYMGPGAVKGDGKAFIMPGPLDDGSLSIAIRLQTSHMEVFKEYFYKDI 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi476g00020 460 Gene3D - 1 211 IPR023213 -
Sebi476g00020 460 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 456 - -
Sebi476g00020 460 Gene3D - 218 458 IPR023213 -
Sebi476g00020 460 Pfam Transferase family 1 458 - -
Sebi476g00020 460 Coils Coil 234 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi476g00020 Sebi-Chr476 239153 240928 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi476g00020 1 458 Monolignol Biosynthesis Gene Families AT5G48930 36.245 3.42e-101 307