Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi476g00015 ATGGCCTCTCCTTATTCTTTGCTTTTGATTTCTTGCCTTGTAGTAGTATTGGATTCCTCGTCCCACTTTCAAGTATCAGAGGCACAAGCCCTTCCTCCAGTAGTGAAGGGACTGTCCTTTTCATTTTTTTCCAAGACATGTCCTCAGCTTGAAAACATCGTCAGAAATCATCTCAAGAAGGTGTTCAAGCAGGACAATGGCCAAGCTCCCGGGGAAAGGGATCAAATAGCAAACGGAGGGATGAGGACAGAGGCATTGAAGACCATAGATGACCTGCGAGGTCTTGTTCACAAGGCCTGTGGTAACATTGTCTCCTGTGCTGACATCACTGTCTTGGCAGCTCGTGATGCTGTTTTCCTTTCTGGTGGACCTGATTTTGCAGTGCCACTAGGAAGAAAGGATGGTGTAACCTTTAACATAGAAGGAACAAACAAGCTTCCATCTCCTTTTAGCAACACAACTCAAACCATCAAAACTTTTGCTGAAAAAAACTTTGATGTCATAGATGTGGTAGCATTCTCAGGTGCACATACTTTTGGCCGTGCACATTGTGGCTCATTCTTCAACAGGCTTTCCCCTGTTGACCCTACCATGGACAAAACCTTAGCACAAAATCTCAAGGCCACTTGCCCTGACAGAAACTCACAGAACACTGCCAATTTGGACATCAGAACCCCAACAGTGTTTGATAATAAGTATTATATTGATCTAATGAACCGTCAAGGTGTGTTCACTTCAGATCAGGACTTGCTCAATGATCAGAGGACTAAAGGATTAGTTAACTCCTTTGCCAATGACCAGAACCTGTTTTTCCAAAAGTTTGTGAGTGCTGTGATAAAGTTGAGCCAATTGGATGTGTTGACAGGGAATCAAGGTGAAATTCGTGCAAAGTGCAATGTGATTAACAAGAAGAAATCTGTGTTGACATCTGTGGTGGAAGAGGTGGTAGAATTCACTAATCAGTTCTAA 969 0.4314 MASPYSLLLISCLVVVLDSSSHFQVSEAQALPPVVKGLSFSFFSKTCPQLENIVRNHLKKVFKQDNGQAPGERDQIANGGMRTEALKTIDDLRGLVHKACGNIVSCADITVLAARDAVFLSGGPDFAVPLGRKDGVTFNIEGTNKLPSPFSNTTQTIKTFAEKNFDVIDVVAFSGAHTFGRAHCGSFFNRLSPVDPTMDKTLAQNLKATCPDRNSQNTANLDIRTPTVFDNKYYIDLMNRQGVFTSDQDLLNDQRTKGLVNSFANDQNLFFQKFVSAVIKLSQLDVLTGNQGEIRAKCNVINKKKSVLTSVVEEVVEFTNQF 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi476g00015 322 SUPERFAMILY Heme-dependent peroxidases 32 302 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Haem peroxidase superfamily signature 169 184 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Haem peroxidase superfamily signature 222 237 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Haem peroxidase superfamily signature 122 134 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Haem peroxidase superfamily signature 104 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 CDD secretory_peroxidase 37 301 IPR033905 GO:0004601|GO:0042744
Sebi476g00015 322 Pfam Peroxidase 71 266 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 Gene3D - 67 299 - -
Sebi476g00015 322 FunFam Peroxidase 147 281 - -
Sebi476g00015 322 Gene3D Peroxidase, domain 2 148 282 - -
Sebi476g00015 322 ProSiteProfiles Plant heme peroxidase family profile. 37 302 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Plant peroxidase signature 236 253 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Plant peroxidase signature 47 66 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Plant peroxidase signature 276 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PRINTS Plant peroxidase signature 220 235 IPR000823 GO:0004601|GO:0006979|GO:0020037
Sebi476g00015 322 PANTHER - 71 302 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi476g00015 Sebi-Chr476 174658 178061 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi476g00015 7 317 Peroxidase AT1G71695 49.708 9.93e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi476g00015 K00430 - gmx:547550 460.685