Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00062 ATGGTGCTTACAGTGCTGCTTGTCGAAGGAGATCGTTCTACTCGCCAGATCATCGCTGCACTACTCAAAAAATGCAGTTACAGAGTTATTGCTGTTCCTGATGGATTAAAGGCATGGGAGACGTTGAAGAGGAAGGCACCTGACCTAGATCTCATATTAACAGAAGTGGAGTTGCCAGCAATATCTGGATTTGCACTTCTTTCTTTGATCATGGAGCATGATGTGTGCAAAAATATTCCTGTTATAATGATGTCTTCTCACAATTCAGTTAGCATGGTGTTGAAATGCATGTTAAAAGGTGCAGCTGATTTTCTTATCAAACCTGTTCGGAGAAATGAGCTTACGAACTTGTGGCAGCATGTGTGGAGAAGGCATGCTATTAGCAGGCCTCCCCAAGATACAACATTTTCAGAGAAAAAACTTAAAGCTGCCACAGAAGACATTTCTGCAAGCAATCAATCGAGTGGTTCTGTGGATTCCTCACAGAAAAATGATGAATGCAGTGAGAAATTGAGCGAGGCTCAAAGCACATGTACATCACCATTTTTGGAAGCTGAAAGTTCGCACATGGAAAATATGCAGAACCCATCCCAGCTAAAGAGTTCTTCGAAGTTGAGCAACATTGATACAGTGAAGCATGAGGAGTTCACCAAATTTGTAAGGGAAACAGCAAAGCATAATGATGAAACAGGAGAAAAATCAAATACATTTGCACCAGAGGCTGCAAGGTGGAACAAAACTTTTAAATTGACAGATTTAAGGCTAGAGCAAGATCATGGTTCTGCTGAAACTGAAAACAAAGATGAAACTTTTAGAGCTGAGTTAAGCACAAAAAATCCTAGCATTAGTACCAAGATACATGGATGCAGTCATGAGCTGGAAGAGCCTTCTAGAGGAGCTATTAATTTGATTACCACATTTGAAAATCCTCCTAAGCACACTAATGAAAACTGTTGTCTTGATGGTGGTAACATAACCAAGTTTGATTTTGATACACAATTGGAGCTTTCTTTAAAAAGAGATTTTCCTGGCAGCTCATGTAAACAAGCAAGTGAAGCAAATGAGGAGTGGCGAAGATTGAACCATTCAAATACTTCCGCCTTCTCTTGGTATAGTGGTAGTAAGTTGTTTCAATCGCTTTTTTCAAGAACACCGATTACATCTGCCATAGTAAACAATGCCAATTGGGATTCGCCTGAATCTCATAAATCATCTGGAATTACTGCTGTTAATGATTGTCAGTATGATGGCTCAAATCAAAATCAAGAGAATGTGACCAGTAAGATCTTTACTTCTGTGTTTCCTGCTCAACCTGTTCTACATCCCATACGGAATGTAAAACCAGTCTGCCAGAAAGAGAGTTCTCCTTTTCCCTCAAGTACCTCTTCCCAGTCCAATGCTGAAACTCACAACTCAGACCAACATAATCACAGGTCCAATGATGCTAATTATACGTGTCCATTTGATAAAATGAATTTGGATCATGCAAAACATGATTCTTCTGCAACTGGTCAGAGTGCTAATAATTTTTGCAATGATGCTGCAAATCATATTAATAGTGCATATGGAAGCATAGACTGTGGAAATGATGGAAAAGCTACTTCAACTATGATAGCTGAGAACAACCCAGAAATTTTCAGTGGTGGTGGTTGCCAAAATTATGATGGATTTAGATTGACAGATTCTCATCGCTCCAGTCAAAGAGAAGCAGCTTTAACAAAATTTCGGCTGAAGCGGAAAGAGAGATGTTATGAGAAAAAGGTTCGATATCAAAGCCGGAAAAGACTGGCAGAGCAGCGCCCTCGGGTGAAAGGACAGTTTGTACGCCAAGTACACAATGATCATCCAGTAGCTGATGCTGGTGGTGATTCCTGA 1875 0.4011 MVLTVLLVEGDRSTRQIIAALLKKCSYRVIAVPDGLKAWETLKRKAPDLDLILTEVELPAISGFALLSLIMEHDVCKNIPVIMMSSHNSVSMVLKCMLKGAADFLIKPVRRNELTNLWQHVWRRHAISRPPQDTTFSEKKLKAATEDISASNQSSGSVDSSQKNDECSEKLSEAQSTCTSPFLEAESSHMENMQNPSQLKSSSKLSNIDTVKHEEFTKFVRETAKHNDETGEKSNTFAPEAARWNKTFKLTDLRLEQDHGSAETENKDETFRAELSTKNPSISTKIHGCSHELEEPSRGAINLITTFENPPKHTNENCCLDGGNITKFDFDTQLELSLKRDFPGSSCKQASEANEEWRRLNHSNTSAFSWYSGSKLFQSLFSRTPITSAIVNNANWDSPESHKSSGITAVNDCQYDGSNQNQENVTSKIFTSVFPAQPVLHPIRNVKPVCQKESSPFPSSTSSQSNAETHNSDQHNHRSNDANYTCPFDKMNLDHAKHDSSATGQSANNFCNDAANHINSAYGSIDCGNDGKATSTMIAENNPEIFSGGGCQNYDGFRLTDSHRSSQREAALTKFRLKRKERCYEKKVRYQSRKRLAEQRPRVKGQFVRQVHNDHPVADAGGDS 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00062 624 CDD psREC_PRR 5 108 - -
Sebi475g00062 624 MobiDBLite consensus disorder prediction 131 207 - -
Sebi475g00062 624 Pfam CCT motif 568 610 IPR010402 GO:0005515
Sebi475g00062 624 SUPERFAMILY CheY-like 3 130 IPR011006 -
Sebi475g00062 624 ProSiteProfiles Response regulatory domain profile. 4 122 IPR001789 GO:0000160
Sebi475g00062 624 MobiDBLite consensus disorder prediction 146 162 - -
Sebi475g00062 624 PANTHER TWO-COMPONENT RESPONSE REGULATOR 4 376 IPR045279 GO:0009736
Sebi475g00062 624 MobiDBLite consensus disorder prediction 171 206 - -
Sebi475g00062 624 MobiDBLite consensus disorder prediction 452 470 - -
Sebi475g00062 624 Pfam Response regulator receiver domain 5 116 IPR001789 GO:0000160
Sebi475g00062 624 SMART REC_2 3 118 IPR001789 GO:0000160
Sebi475g00062 624 ProSiteProfiles CCT domain profile. 568 610 IPR010402 GO:0005515
Sebi475g00062 624 Gene3D - 1 249 - -
Sebi475g00062 624 MobiDBLite consensus disorder prediction 450 486 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00062 Sebi-Chr475 738604 742554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00062 552 613 Response Regulator Gene Family AT5G24470 70.312 3.39e-21 95.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Sebi475g00062 Response_reg 2.3e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00062 K12130 - gmx:100791698 790.03