Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00058 ATGGCTAATTCATTAGAAAATAATAAAGGTGAAGCAAAGCAAGGAGGCAATGTGCAAGAAGATGATGGCATTATTTTTGCCATGAGCATGATGTCTTCTATTGTATTTCCACAAGCGGTTCGGTCAGCAGTTGAGCTTGGTATCTTTGACATCTTAGCCAAAGCAGGGGAAGGTGTCAACCTCTCTTCAAAGGACATTGCAATTCAAATTGCCTCAAAGAACCCAGAAGCACCTATAATGCTAGATCGCCTCCTAAGATTATTGGCTAGTCACTCTATGCTTTATTGTTCACTTACTGAAGATCATCAAGGGCATGAGCCTCCTCAAAGGCTCTATAGGCTCGCCCCTGCATCCAAGTACTTTGTGACCGATGTTGATGGTGTGTCATTTGGACATACTTTGAACTTACTCCTAGACAAGGTCTTCTTAGAAAGCTGGACTGAACTTAAGGGAGCAATCTTGGAAGGAGGTATACCCTTCAACAGGGTTCATGGAATGAATGCATTTGAGTATCCAAGTGTGGATCCTAGGTTCAATGATGTTTTCAACAAAGCTATGCTCAACATTACCACTATACTCATGAAGAGGGTTCTTGAGTTCTACAAAGGTTTTGAGAACATCAATAGACTAGTGGATGTTGGTGGAGGTCTTGGAATCAATCTCAAGCTAATCACTTTAAAATATCCTCATGTCCAGGGTGTTAATTTTGATTTGCCTCATGTCATAGAGCATGCCCCTACATATGTTGGCGTGACACATGTGGGAGGGGATATGTTTGAGAGTGTGCCTAATGGAGATGCCATTTTTATGAAGTGGATACTTCACGACTGGAGTGATGAACACTGTTTGAAGTTGTTGAAGAATTGCCACAAAGCTATTCCAAGTGATGGAAAAGTGATTGTTGTGGACTCAATTATTCCCGTTTTGCCAGAAAGTACACTCATTGCCCAAAATGGTTTTCAAGCTGACCTTCTAATGATGACTCAAAACCCAGGAGGAAAAGAGCGAACCCAAAATGAATTCTTAGAATTGGCATTACAATCTGGATTTAGTGGTATTAGACACGTCTGTTGTGTCTCTGGTTTATGGGTTATGGAGTTTTTCAAGTAG 1110 0.4108 MANSLENNKGEAKQGGNVQEDDGIIFAMSMMSSIVFPQAVRSAVELGIFDILAKAGEGVNLSSKDIAIQIASKNPEAPIMLDRLLRLLASHSMLYCSLTEDHQGHEPPQRLYRLAPASKYFVTDVDGVSFGHTLNLLLDKVFLESWTELKGAILEGGIPFNRVHGMNAFEYPSVDPRFNDVFNKAMLNITTILMKRVLEFYKGFENINRLVDVGGGLGINLKLITLKYPHVQGVNFDLPHVIEHAPTYVGVTHVGGDMFESVPNGDAIFMKWILHDWSDEHCLKLLKNCHKAIPSDGKVIVVDSIIPVLPESTLIAQNGFQADLLMMTQNPGGKERTQNEFLELALQSGFSGIRHVCCVSGLWVMEFFK 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00058 369 FunFam Caffeic acid 3-O-methyltransferase 6 121 - -
Sebi475g00058 369 PIRSF O-mtase 5 369 IPR016461 GO:0008168
Sebi475g00058 369 Gene3D Vaccinia Virus protein VP39 123 369 IPR029063 -
Sebi475g00058 369 PANTHER O-METHYLTRANSFERASE 27 350 IPR016461 GO:0008168
Sebi475g00058 369 FunFam Caffeic acid O-methyltransferase 122 369 - -
Sebi475g00058 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 127 367 IPR029063 -
Sebi475g00058 369 Pfam O-methyltransferase domain 146 351 IPR001077 GO:0008171
Sebi475g00058 369 CDD AdoMet_MTases 209 302 - -
Sebi475g00058 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 369 IPR016461 GO:0008168
Sebi475g00058 369 SUPERFAMILY "Winged helix" DNA-binding domain 20 124 IPR036390 -
Sebi475g00058 369 Gene3D - 6 121 IPR036388 -
Sebi475g00058 369 Pfam Dimerisation domain 40 89 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00058 Sebi-Chr475 693951 696020 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00058 17 369 Monolignol Biosynthesis Gene Families AT5G54160 52.975 4.53e-137 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00058 K13066 - gmx:100789402 584.719