Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00053 ATGGAAACCGATCCAAAACTCAATGAGGTGGAAGCAAAACAAGTACCACCAAGAAAAGGAGAGCCAAACCTGGAAGATGAAGTAGAAAGCTTCTGCTATGCCATTCAGATGGTGAATTCTGTTTCTCTGCCCATGTCCTTGCATGCTGCTTTGGAGCTTGGAGTGTTAGATATAATAAATAAATCAGGTGCAGGTGCCAAGGTCTCGGCAAAGGACATTGCAGCACAGATTACAAGCAAGAATCCAGATGCAGCCATCATGCTAGATAGGATCCTCATGCTACTAGCCAGTCACTCTGTGCTTCATTGTTCTGTTGTTGCTGATGAAAGTGGTTCTTTCAAGAGATTATACAGTCTAAATTCTGTATCCAAATATTTAGTGCCCAATGAGGATGGGGTGTCGTTGAAGCCTCTCATGGCATTGATTCATGACAAGGTCTTCTTACAAAATTGGTCTCAATTGAAAGAGGCAATGTTGGAAGGGGGTATACCCTTCAACAGAGTTCATGGCATGCATGCCTTTGAGTATCAGAGTTTCGACTCCAGGTTCAATCAAGTATTTAACACGGCAATGAGCAACGTCACGCGTTTGGCAGCAAAGAAGATTCTTGAATCCTACAAAGGCTTTGACCAAATCAACAGCACGCTCGTGGATGTTGGAGGTGGTCTTGGGACTACCCTTAATTTCATCATTTCCAAATACCCACACATTCAGGGTATTAATTTTGACTTGCCTCATGTCATCAAACAAGCTCCATCATACCCGGGTGTGAAGCATGAGGGAGGGGATATGTTTGAAAGTGTTCCGCACGGAGACGCCATATTTCTGAAGCTTGTACTGCATGATTGGAGTGATGAGTGTTGCGTGAAACTGTTGAAGAATTGCTATGATGCTATTCATATTGGTGGGAAGGTAATTGTCGTGGAGCAAGTCCTTCCAACAATGCCTGAAACTAATACTTCCGTTAAATCCACATGCCAAACTGATGTTCTTATGATGACTCAAAATCCTGGAGGAAAGGAGAGAAATGAACAAGAATTTATGGAACTAGCAACAAGATCAGGATTTAGCAGCATTGGATGTGATTGTTTTGCTTATGACCTTAGGATTATGGAGTTCTTCAAGTAG 1128 0.4255 METDPKLNEVEAKQVPPRKGEPNLEDEVESFCYAIQMVNSVSLPMSLHAALELGVLDIINKSGAGAKVSAKDIAAQITSKNPDAAIMLDRILMLLASHSVLHCSVVADESGSFKRLYSLNSVSKYLVPNEDGVSLKPLMALIHDKVFLQNWSQLKEAMLEGGIPFNRVHGMHAFEYQSFDSRFNQVFNTAMSNVTRLAAKKILESYKGFDQINSTLVDVGGGLGTTLNFIISKYPHIQGINFDLPHVIKQAPSYPGVKHEGGDMFESVPHGDAIFLKLVLHDWSDECCVKLLKNCYDAIHIGGKVIVVEQVLPTMPETNTSVKSTCQTDVLMMTQNPGGKERNEQEFMELATRSGFSSIGCDCFAYDLRIMEFFK 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00053 375 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 35 375 IPR016461 GO:0008168
Sebi475g00053 375 FunFam Caffeic acid O-methyltransferase 127 375 - -
Sebi475g00053 375 Pfam Dimerisation domain 45 96 IPR012967 GO:0046983
Sebi475g00053 375 SUPERFAMILY "Winged helix" DNA-binding domain 26 130 IPR036390 -
Sebi475g00053 375 Gene3D Vaccinia Virus protein VP39 128 375 IPR029063 -
Sebi475g00053 375 Pfam O-methyltransferase domain 151 357 IPR001077 GO:0008171
Sebi475g00053 375 FunFam Caffeic acid 3-O-methyltransferase 14 126 - -
Sebi475g00053 375 PANTHER O-METHYLTRANSFERASE 37 362 IPR016461 GO:0008168
Sebi475g00053 375 Gene3D - 16 126 IPR036388 -
Sebi475g00053 375 PIRSF O-mtase 16 375 IPR016461 GO:0008168
Sebi475g00053 375 MobiDBLite consensus disorder prediction 1 23 - -
Sebi475g00053 375 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 131 372 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00053 Sebi-Chr475 656639 665094 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00053 29 375 Monolignol Biosynthesis Gene Families AT5G54160 52.161 2.88e-131 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00053 K13066 - zju:107418659 466.077