Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00048 ATGGCTCCAGAGATAATTGAAAGTCAAAAGTATGATGCCAAGGCTGATTTATGGAGTGTTGGGGCAATATTGTATCAGTTGGTGATTGGGAGGCCACCATTTGATGGAAATAGTCAATTGCAGCTTTTTCAAAATATTTTGGCATCTACTGAACTGCACTTTCCACCAGAGGCTTTAAAAGAGCTACATTCTGATTGCTTGGATCTTTGCAGAAGCCTATTACGTCGAAACCCAGATGAGAGATTAACATTCAAAGCGTTCTTCAATCACAATTTCCTACAGGAACCCAGGTCCATCATGAATATTGAGCAGTTTCAGTTACATCAATCAGAAACATCAATGGTTCATCAATTAGTTGGCTCTGCCTCTGAGAAGATGTCTCAATCACACTCTGAGTATCATGTTGAGTCATTTGTTGATGATCCAGTGGTAGGCAGTTCAGCTGTCAATGAGACCATGCTTTTGCAAAGAAAGGATGGCAAGTTTACAGCTGGCACTAAGAGTGTTAGAGGGTCAACTCCAACTATTGCAAGTGGTAAGCTGGGGAAGTCTGTTGATGCTGGTACTCATTTGCCAAACCAACCTCAAGTATCCCATTTAATGGAGTCCATTGAGAAAGATTATGTCCTCATCAATTCTCATTTTGCATCACTGGAAGCTTTCTCTGACTACTTTGAGGCATCTGTGCAAGATAAATGTTCAAGCAGGGTTTCTATCTGTCCTTCAAAGAGGACTAACCTGGAGACTGGAGTTGCAAAGCAAACAAATGATCTGTCCTCTTCCTCCACTGATGGGTTAGAAGGTTTTAAAAGAAATGAACTTGAGGCATCAGTGGGATTCTGTGAGTTTGCTGCCTCAAGGAAAGAGCAGGGAATTTCGTCTCAGCACCCTTCAAACAGGTTAGGGTTGTTGCATCAGTATGTGCAGATCCTTGGAGAAATTTCGCAAGAAAAGTATAATACAGGACTGTATCTAGAGTCGCTTGCAGTTGAGTTGGTGATTTTAGCTATATGGAAAAAAGCTCTAGAAATTTGTAGCTCTTGGATAGCCTCCATGGCTGAGGGTGAGCTGCCTGGAAGCAGTTCAGCTAATGAATTCATATTTGCCTGTGGAGATGGGAGCATATCACAGACAATGGAACAGAAAATAAACTTTAGTGATCCTCCATCTGTCTCCTTGTGGGCCAAACATGGGTTTATTGTTGCAGTTGATCGTGCTGAGAAATTAACACGTCATATTCAAAACATGGATGGGGCAGCTGAGATGCCAGATGCAATGGAGATTATATTCCGACAAGCACTCTTAATCGGGACAAGTGGTGCTGTAGATGAGTATATGAAGAACGGAGATAGAGCTGCTGCATCCTACTCAAAAGCAATACTTCTACTTTCATTTATTGTCGAAGAAGCAGAGAACCTTCCACTGAACCCACCATTTTCACTTCATGATGCTAATAAGAAGAGAATCTTACAGTACATTCGCAACTTGCAGTTTCGTAAAAAATCATCATCAGAGTCCTCTACAAAGGAATCCCATGCTCTTACGACAAAGTAA 1554 0.4157 MAPEIIESQKYDAKADLWSVGAILYQLVIGRPPFDGNSQLQLFQNILASTELHFPPEALKELHSDCLDLCRSLLRRNPDERLTFKAFFNHNFLQEPRSIMNIEQFQLHQSETSMVHQLVGSASEKMSQSHSEYHVESFVDDPVVGSSAVNETMLLQRKDGKFTAGTKSVRGSTPTIASGKLGKSVDAGTHLPNQPQVSHLMESIEKDYVLINSHFASLEAFSDYFEASVQDKCSSRVSICPSKRTNLETGVAKQTNDLSSSSTDGLEGFKRNELEASVGFCEFAASRKEQGISSQHPSNRLGLLHQYVQILGEISQEKYNTGLYLESLAVELVILAIWKKALEICSSWIASMAEGELPGSSSANEFIFACGDGSISQTMEQKINFSDPPSVSLWAKHGFIVAVDRAEKLTRHIQNMDGAAEMPDAMEIIFRQALLIGTSGAVDEYMKNGDRAAASYSKAILLLSFIVEEAENLPLNPPFSLHDANKKRILQYIRNLQFRKKSSSESSTKESHALTTK 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00048 517 ProSiteProfiles Protein kinase domain profile. 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi475g00048 517 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 1 376 IPR045269 GO:0004674|GO:0006914
Sebi475g00048 517 MobiDBLite consensus disorder prediction 165 187 - -
Sebi475g00048 517 Pfam Protein kinase domain 1 93 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi475g00048 517 SUPERFAMILY Protein kinase-like (PK-like) 1 135 IPR011009 -
Sebi475g00048 517 Gene3D Transferase(Phosphotransferase) domain 1 1 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00048 Sebi-Chr475 591053 594163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00048 1 95 EF-hand Containing Proteins AT4G23650 36.842 1.30e-12 68.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Sebi475g00048 Pkinase 4.1e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00048 - K08269 gmx:100779262 737.258