Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00047 ATGACCCGGTTGGTCGGGGATTACATACTGGGTCCTCGAATCGGGTCGGGTTCATTCGCGGTGGTGTGGCGTTCGCGGCATCGACACTCAGGTTTGGAATTTGCGGTGAAAGAGATTGACAAGACGCAGTTGAGTCCCAAAGTGAGAGAGAATCTGATCAAAGAGATTTCTATCCTCAGCACCATCGATCACCCTAACATCGTTCGTCTCTTCGAAGCAATCCAGACCAATGACAGGATTTACCTTGTTTTGGAGTATTGTGGTGGTGGGGACCTCGCTGGTTACATCAATCTCCATGGCAGAGTTTCAGAACCCATTGCTCGCCATTTCATGAGGCAATTGGGTGAGTACAGTTGA 357 0.4958 MTRLVGDYILGPRIGSGSFAVVWRSRHRHSGLEFAVKEIDKTQLSPKVRENLIKEISILSTIDHPNIVRLFEAIQTNDRIYLVLEYCGGGDLAGYINLHGRVSEPIARHFMRQLGEYS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00047 118 SUPERFAMILY Protein kinase-like (PK-like) 4 114 IPR011009 -
Sebi475g00047 118 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Sebi475g00047 118 FunFam Non-specific serine/threonine protein kinase 1 88 - -
Sebi475g00047 118 SMART serkin_6 8 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi475g00047 118 Pfam Protein kinase domain 11 114 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi475g00047 118 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 3 116 IPR045269 GO:0004674|GO:0006914
Sebi475g00047 118 ProSiteProfiles Protein kinase domain profile. 8 118 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi475g00047 118 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00047 Sebi-Chr475 588853 589306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00047 4 114 CBL-interacting serine-threonine protein kinases AT2G30360 40.708 2.40e-24 94.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Sebi475g00047 Pkinase 2.9e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00047 - K08269 tpra:123884297 202.986