Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00046 ATGACAGCCTGTATCAAGGATGGACAGGAAGCATATGGAAGTGACTGCTACATCAAAAGACATGCTCAAAGGAAAATGGTTATCATTGCCGGAATCCTTGGTCCAGTTCTTATTGTCGCCTCCTTGGTTGCACTATTTTACCTTCTTAAAAGAAAAGAAAAGCCAGGAATGTTTGATGCTGAGCAGGCTTATTATCACAACATTTCATTTCGCAAAGCTTGTAGAACTAGACTATTCAGCCACCGTGAGCTAGAGGAAGCCACCAATGGTTTTGAAGAGGATCAGAAACTTATGCATGGAAGTAATGGGACAATATTTGCTGGAGTTCTTGGTGATGGATCTCACATAGCTGTCCACAAGTTAAAATGTGAGAATGAGAAAGACATAATTCAAGTCTTGTCACAAATTGAGGTTCTATCTGCTGTTGTACATAGGAATATTGCTTCCCTTCTTGGATGCTGTATTGACTCTGGCCACACTCCTCTAATTGTCTATGAGTATCCTGCAAATGGTACCTTAGAGGAGCATTTAAGCCAAAGAAAAGGACAGAATTTACACTGGTATAGGAGATTGACTATTGCTGCAGAAACAGCTAGTACTATTGCACTATTACATTATGAAATCTCTCCTCCCATATTTCACCATAACCTTAAGTCTAGCTGCATTTTCCTAGATGATGATTTTTCTGTCAAGATTGCAGGATTTGGACTGCTTAATTCTGATTTTACTACTTATGATTCTCACTTGTACAAGAACCATGAATGCTTGCGCCTGTTCAAAAATGATGTCTATGACATGGGAGTGGTGCTTATTGAGATTATCTCAGGCTCAAATCAATTGGACTCACCAACTTCAGCCTTGCAGAAAATAAGGGCTGGAAAGCTAGAAGAAATTGTTGATCCACTTCTTTACTATCATGAACAACCACATCATCGCCAAGAGCAAATACAAATAATTGCAGACCTTGCAACAAGATGCTTGCTATTTGGTGCTGATGGAAAGCTAGGAATGATTGATGTTGCAAGGGAGTTGGTACATATAACTAAAGAGAGTCCTGATGGAGGAACTATGAGAGGACCTGCATTGGAAGAGACATTCTCAAATTCAAGCCTTCTTCAAATGATATCAATGTCTCCTGATTCTATGAATGTTCCTTGA 1158 0.3946 MTACIKDGQEAYGSDCYIKRHAQRKMVIIAGILGPVLIVASLVALFYLLKRKEKPGMFDAEQAYYHNISFRKACRTRLFSHRELEEATNGFEEDQKLMHGSNGTIFAGVLGDGSHIAVHKLKCENEKDIIQVLSQIEVLSAVVHRNIASLLGCCIDSGHTPLIVYEYPANGTLEEHLSQRKGQNLHWYRRLTIAAETASTIALLHYEISPPIFHHNLKSSCIFLDDDFSVKIAGFGLLNSDFTTYDSHLYKNHECLRLFKNDVYDMGVVLIEIISGSNQLDSPTSALQKIRAGKLEEIVDPLLYYHEQPHHRQEQIQIIADLATRCLLFGADGKLGMIDVARELVHITKESPDGGTMRGPALEETFSNSSLLQMISMSPDSMNVP 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00046 385 FunFam probably inactive receptor-like protein kinase At2g46850 63 167 - -
Sebi475g00046 385 Gene3D Transferase(Phosphotransferase) domain 1 169 357 - -
Sebi475g00046 385 FunFam Putative WAK-related receptor-like protein kinase family protein 169 357 - -
Sebi475g00046 385 Gene3D Phosphorylase Kinase; domain 1 62 167 - -
Sebi475g00046 385 Pfam Protein tyrosine and serine/threonine kinase 94 278 IPR001245 GO:0004672|GO:0006468
Sebi475g00046 385 SUPERFAMILY Protein kinase-like (PK-like) 73 344 IPR011009 -
Sebi475g00046 385 ProSiteProfiles Protein kinase domain profile. 91 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi475g00046 385 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 16 381 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00046 Sebi-Chr475 557543 559422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00046 4 347 Receptor kinase-like Gene Family AT2G23450 36.096 1.71e-59 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Sebi475g00046 PK_Tyr_Ser-Thr 6.3e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00046 - - gmx:100810557 597.816