Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00026 ATGAACTCACCAGCCCAGCTAAATTGGCCTGCAAATGGTGATAATCCTTGTGGACAGTCTTGGAAAGGCATCACTTGCTCAGGCAACCGAGTCACAGAGATAGACCTGAGTAACAACAATATTGGGGGCTCCATACCATACGGACTTCCTCCAAATGTGCAGCACCTAAATCTTGCTAATAATATTTTGAATGGCTCCATACCTTATTCTCTTTCTGATATGACTTCACTTATAGACCTGAATCTTGGCCACAATCAACTCCAACAACCACTGAATGTTGACTTTCAGAAGCTTTCTTCCCTTTCTACATTGGATCTCTCGTTCAATTCTTTAACAGGTGACCTCCCTCAGACTTTGAGCTCACTTTCAAGCATAACCACCATGTATCTGCAAAACAACCAGTTCACAGGCACCATCAATGTCCTCGCTGATCTGCCTCTTGAGATTCTGAATGTAGCAAACAATCATTTTACAGGCTGGGTACCAGAACAGTTAAAAACCATAAACTGCAGTGAGCATTGGCATTATCAGAAATTTCTTAAGAATCTGTTATTCATCATAAATTCTATAAAACTTAAAATGGTCAAATTTAATGACAGAAAGGATGGCAATGCATGGAGCTCAGGACCTGCACCCCCACCTCCTCCCGGGACACCTCCAATAACAAAAGGCAATCGAAGTCACAAGTCTGGTGGACATGGCACCTCATCTGATGCTGGCACAAGTGATGGTGGCAAAAAATCTGCATTCTTTCTGGTGAAGAGAAGATCTAAGAAGTCATTTTCAGATGTGGAAAAGCTTGACAATCAGCCCTTGGCTCCTCTTACTTCAAATGAAGTCCATGAAATGAATTCCGTGCAAACTTCTTCTATAATTGATTTGAAGACATTTGATGCTTCCGAGGCCTCAATCAGTCTTAAACCCCCACCTTTTGATCGTCGTAAATCATTTGACGAGGATGAGTTTCCAAAGAAGCCTGCTATTGTCAAGAAGACTGTAGCATTTCCTGCAAATGGGTCTTTTGGCCGTGTATACCGTGCTCAATTTGATGATGGAAAGGTTCTTGCTGTGAAGAAGATAGATTCATCTGTCCTTCCCAGTGATTTGTCTGATGATTTTGCAGAAGTAGTTTCAAACATCTCCCATTTGCATCATCCCAATGTGACAGAGCTTGTAGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTATGAGTTTCATAAAAATGGATCACTGCATGATTTCCTTCACCTACCTGATGAGTATAGTAAACCACTGATATGGAATTCACGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTAGAGTACCTACATGAAGTTTGTTCACCATCAGTTGTTCACAAGAATATTAAGTCAGCCAACATATTGCTTGATGTTGATCTTAATCCTCATCTCTCAGACAGTGGATTGGCTAGCTATATTCCAAATGCAAACCAGGTATTGAACAACAATGCTGGATCTGGATATGAAGCTCCCGAAGTTGGCTTGTCTGGTCATTACACTCTTAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAACTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCAGTCTTTGGTTCGATGGGCAACACCTCAACTCCATGATATTGATGCATTAGCTAAAATGGTTGATCCTGTATTGGAAGGACTATACCCTGTCAAGTCTCTTTCTCGATTTGCTGATGTTATTGCTCTTTGTGTTCAGCCGAACCTGAATTCCGACCACCAATGTCAGAAGTGGTTCAAGCACTGGTTCGATTAG 1815 0.4198 MNSPAQLNWPANGDNPCGQSWKGITCSGNRVTEIDLSNNNIGGSIPYGLPPNVQHLNLANNILNGSIPYSLSDMTSLIDLNLGHNQLQQPLNVDFQKLSSLSTLDLSFNSLTGDLPQTLSSLSSITTMYLQNNQFTGTINVLADLPLEILNVANNHFTGWVPEQLKTINCSEHWHYQKFLKNLLFIINSIKLKMVKFNDRKDGNAWSSGPAPPPPPGTPPITKGNRSHKSGGHGTSSDAGTSDGGKKSAFFLVKRRSKKSFSDVEKLDNQPLAPLTSNEVHEMNSVQTSSIIDLKTFDASEASISLKPPPFDRRKSFDEDEFPKKPAIVKKTVAFPANGSFGRVYRAQFDDGKVLAVKKIDSSVLPSDLSDDFAEVVSNISHLHHPNVTELVGYCSEHGQHLLVYEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDVDLNPHLSDSGLASYIPNANQVLNNNAGSGYEAPEVGLSGHYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEQSLVRWATPQLHDIDALAKMVDPVLEGLYPVKSLSRFADVIALCVQPNLNSDHQCQKWFKHWFD 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00026 604 Gene3D Transferase(Phosphotransferase) domain 1 409 599 - -
Sebi475g00026 604 SUPERFAMILY L domain-like 8 172 - -
Sebi475g00026 604 PANTHER LEUCINE RICH REPEAT KINASE 2 31 591 - -
Sebi475g00026 604 Gene3D Phosphorylase Kinase; domain 1 332 407 - -
Sebi475g00026 604 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 331 407 - -
Sebi475g00026 604 Gene3D Ribonuclease Inhibitor 1 331 IPR032675 -
Sebi475g00026 604 MobiDBLite consensus disorder prediction 223 243 - -
Sebi475g00026 604 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 179 - -
Sebi475g00026 604 ProSiteProfiles Protein kinase domain profile. 330 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi475g00026 604 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 408 595 - -
Sebi475g00026 604 MobiDBLite consensus disorder prediction 203 244 - -
Sebi475g00026 604 Pfam Leucine Rich Repeat 100 122 IPR001611 GO:0005515
Sebi475g00026 604 SUPERFAMILY Protein kinase-like (PK-like) 338 590 IPR011009 -
Sebi475g00026 604 Pfam Protein tyrosine and serine/threonine kinase 338 536 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00026 Sebi-Chr475 306207 312904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00026 1 587 Strubbelig Receptor Gene Family AT1G53730 58.045 0.0 692
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sebi475g00026 PK_Tyr_Ser-Thr 1.3e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00026 - - gmx:100780323 889.026