Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi475g00006 ATGGAGGATCCGAAGATATCGGCGTACTACCAGACGAGGATGGCTCACTTCGGCGTCGTCAGCACCGAGTGGCTCGCTCAGGCCCAGTCTGCCACTACCAACCCTCCCCCACTCCCACCATCATCCCGCACCGGCGACAGCGACACCAATTTCTCGGTCATCGATGAGTTCAACACGTGGCGGAGCAACCCCGATTTGGCGGAGGCCGTCGCCGCCATTCGCGCCCTCGCCGCCGTCATCAGCTCCAGCAAGGCCTCCACCATGATGCAGCTCGAAATCGAGCTCAAAAACGCCTCCGATTCTCTCAAATCATGGGATACGACCTCTATCTCTTTGACAGCAGCCTGTGATCTGTTTATGCGATATGTGACTAGAACTTCTGCTTTGGAATATGAAGACTTCAATTCAGCTAAATCTCGCTTGATTGAACGCGCTGAAAAGTTTGGGGAAATCTCCTACAAGGCTCGCAAGATTATTGCGATGCTGAGTCAAGATTTTATATTTGATGGTTGCACCATTTTGGTTCATGAGGGGAGACCAGACCGAACAGGTTTAAGGTTGTCCAATGAGCTGGCCAAGCTTGATGTTCCTGTGAAACTAGTAATAGACTCTGCTGTGGCATATACTATGGATGAGGTGGATATGGTATTTGTTGGGGCTGATGGAGTGGTTGAAAGTGGTGGTATAATCAACATGATGGGGACATACCAAATTGGGTTGGTTGCAAAGAGTATGAATAAGCCAGTTTATGTGGCAGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTAGACCAAAAGGATTTGGCCCCTGCCATACGCCCAGTTGATTTCGGTGTACCTATTCCATCCAAGGTTGAGGTTGAATGTTCTGCACGGGATTATACTCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGCGTTCTTACTCCATCAGTTGTTAGTGATGAGCTTATTCAGCTATACTTATAG 978 0.4867 MEDPKISAYYQTRMAHFGVVSTEWLAQAQSATTNPPPLPPSSRTGDSDTNFSVIDEFNTWRSNPDLAEAVAAIRALAAVISSSKASTMMQLEIELKNASDSLKSWDTTSISLTAACDLFMRYVTRTSALEYEDFNSAKSRLIERAEKFGEISYKARKIIAMLSQDFIFDGCTILVHEGRPDRTGLRLSNELAKLDVPVKLVIDSAVAYTMDEVDMVFVGADGVVESGGIINMMGTYQIGLVAKSMNKPVYVAAESYKFARLYPLDQKDLAPAIRPVDFGVPIPSKVEVECSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi475g00006 325 FunFam Translation initiation factor eIF-2B subunit alpha 49 151 - -
Sebi475g00006 325 Gene3D - 155 325 IPR042529 -
Sebi475g00006 325 Pfam Initiation factor 2 subunit family 172 313 IPR000649 GO:0044237
Sebi475g00006 325 Gene3D - 48 151 IPR042528 -
Sebi475g00006 325 SUPERFAMILY NagB/RpiA/CoA transferase-like 52 324 IPR037171 -
Sebi475g00006 325 Coils Coil 88 108 - -
Sebi475g00006 325 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 174 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi475g00006 Sebi-Chr475 52941 55163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi475g00006 6 325 Eukaryotic Initiation Factors Gene Family AT1G53880 75.942 6.87e-179 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi475g00006 K03239 - gmx:102669842 533.872