Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi473g00004 ATGGCTCTTGTGAATGGACCAATTGAAATGGTCAGGAACATATGTGGAGTGAAAGATTCATGGAGATTGAAAGTGAGGGTTGTCCGACTCTGGAAGAGTTGCTCTAAAAACGATCCTAAGAATGTTTTCTCTTTGGAGATGGTTTTGGTGGATGTTGAGGGTGCAAGGATACAGGCAAGTATCTGTAAACTAATGATCAGGAAATTTGCCAATGTTATTGTTGAGGGAGAGGTATACAAGATGATTTACTTTGCTGTTGTGAAGAACGTAGGTAACTTCTGTGCCACCAAACATGAATTCAAGCTAATTTTCAACAGTAGGACAACTGTCTTTCGTGCTGAAAGCCAACTCATTCCAGAGTTTGGTTTGTCATTGTCATCCTCTGAGGATATAAGGAATACGAAGGGGGAATATGAATATTTGTATGACATGATGGGGTTACTTACTGCAGTATCTGCTGAGATAAATATTGTTAAAGATGGGAAAACAACACGATTGATTGTGCTTGAGCTCACTGATGATAAGGGTAAGATAAGGTGTACTCTTTTCGGGGACTATGTAGACAAAGTAAATGAATTCCTATCATTGAGTGGTACACAGTTAACTGTTGTTGTCATTCAATATGCAAGAGTTAACACTTATAAGGGTGATGTTGGTTTGGTCAATGTGTTCAACACCTCACGGCTGTTGTGGAATCCACAAATAGTTGAAGCAATTGAATTTAGAAAAAGTGTTGCTTTCCATGAGGTGAACTCCGATATTTGTATTGGGTTTCTAGATTATGATATTCAATCTTTGTCCATGAAAGATGAGTTTTTGAATCCATTCCCTCGGAAGAATCTGGAAGAGTTACAAACATATGAAGAGGTGTTTAATTTTTCGGTTAATTTCTTTTGA 897 0.3779 MALVNGPIEMVRNICGVKDSWRLKVRVVRLWKSCSKNDPKNVFSLEMVLVDVEGARIQASICKLMIRKFANVIVEGEVYKMIYFAVVKNVGNFCATKHEFKLIFNSRTTVFRAESQLIPEFGLSLSSSEDIRNTKGEYEYLYDMMGLLTAVSAEINIVKDGKTTRLIVLELTDDKGKIRCTLFGDYVDKVNEFLSLSGTQLTVVVIQYARVNTYKGDVGLVNVFNTSRLLWNPQIVEAIEFRKSVAFHEVNSDICIGFLDYDIQSLSMKDEFLNPFPRKNLEELQTYEEVFNFSVNFF 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi473g00004 298 Gene3D - 7 114 IPR012340 -
Sebi473g00004 298 CDD RPA1_DBD_B_like 143 245 - -
Sebi473g00004 298 Gene3D - 118 253 IPR012340 -
Sebi473g00004 298 SUPERFAMILY Nucleic acid-binding proteins 13 114 IPR012340 -
Sebi473g00004 298 Pfam Domain of unknown function DUF223 46 114 IPR003871 -
Sebi473g00004 298 SUPERFAMILY Nucleic acid-binding proteins 129 250 IPR012340 -
Sebi473g00004 298 CDD RPA1_DBD_A_like 22 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi473g00004 Sebi-Chr473 155870 157306 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi473g00004 21 242 Core DNA Replication Machinery Family AT2G06510 27.917 4.07e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi473g00004 - - lja:Lj6g3v0884310.1 248.054