Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00069 ATGGGTGTCGGGGAGAAGAGTCTAACTCTAAAGGGCTTTCATTTGCATCGCCACCATCACCATGGGCATGGGAAGAAGCAAGAGTTCAGAGGGGTACCCAAAGGGTGTCTAGCAATCAAGGTGGGTCAAGGAGAAGAGCAACAGAGGTTCGTGGTGCCAGTGATATACTTCAATCACCCACTCTTCATGCAGCTTCTCAAGGAAGCAGAGGAAGAATTTGGGTTTGATCAGAAGGGAACCATAACCATCCCTTGTCATGTTGAGGAATTCAGGAACGTCCGAGGCATGATTGATAGGGAAAAGTCTCTCCATCACCACCATCATGTTGGCTGCTTTGGCTTCTAA 345 0.4841 MGVGEKSLTLKGFHLHRHHHHGHGKKQEFRGVPKGCLAIKVGQGEEQQRFVVPVIYFNHPLFMQLLKEAEEEFGFDQKGTITIPCHVEEFRNVRGMIDREKSLHHHHHVGCFGF 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00069 114 Pfam Auxin responsive protein 27 94 IPR003676 GO:0009733
Sebi472g00069 114 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 24 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00069 Sebi-Chr472 766650 766994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00069 32 110 Calmodulin-binding Proteins AT5G20810 50.000 2.26e-19 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00069 K14488 - gmx:111188139 195.282