Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00052 ATGGAAGAAGAACAAACCTCCCAATCCCAAAACCAACGTCACCATCTCTCTCCTCCCAAAAAACAAATGAACAAAGGTTCTCCCTACAGCCCCAGTGCAGGTAAACGTGCAGTTTGCACAGTCATCACCATCTTTCTCCTATTAGCTGGCATCACTCTCCTTGTCCTCTGGCTCGTCTACCGTCCCCACAAACCCCGTTTCACAGTCGTCGGCGCCGCCATCTACGGCCTCAACACAACCGCACCACCGCTTATGTCCACCGCCTTGCAGTTCAACATCCTCATAAGGAACCCAAACAAGCGTGTCACCATAATACATAATTCTCTTTCTTTCGAGGGAGCCTCTCAGAAAGGTCAGTTGTTGAACCCGGCCCAAGCTTGTGTTTGGAAGATGCAAGCCGAAGAGCAAAGCAATATGGAGACACAAAGCTCACAGCATGCACAAATTATTGAAATCAGTGGAGATATTCTTCCGGATGTAAGAAGGAACATTTGTGAGGAAGCACCATGTGGATTCTCGAATGCTGGATCCATCTCTAAGGATTCAGAAGAACGATCAACTTCAATGCGGAAGCTTTTGATGGCAGTAGTTCTGTGTGTTATTTTCATGAGCATTGAAGTAGTTGGTGGCATTAAAGCTAATAGCCTTGCAATTTTGACAGATGCAGCCCATTTGCTTTCAGATGTTGCAGCATTTGCCATCTCTTTATTTTCATTATGGGCTGCAGGGTGGGAAGCCAATCCTCGCCAGTCATATGGATTTTTCAGAATAGAGATTCTAGGTGCTTTGGTTTCTATTCAGTTAATATGGTTGCTTGCTGGGATTCTGGAGATGGAACATAAATGTACAAGGGGCTTATCTACATGTACTTGGGGACTCAATCCAGAGTGTTGGGGGACAACTATTAATATGCTGAGGAACATATTGGAAGTCCTTATGGAGAGCACACCACGTGAGATAGATGCAGCTAAGCTTGAAAAGGGGTTGCTGGACATGGAAGAAGTGGTGGCTGTTCATGAGTTGCACATTTGGGCCATTACAGTTGGGAAAGTTTTATTGGCTTGTCATGTTAAAATCAGACCCCAAGTGGATGCAGAATTGGTGCTGGAAAAGGTTATAGACTATATCAGAACGGTTCATAACATCACTCATGTCACTATACAAATAGAGCGCTAG 1176 0.449 MEEEQTSQSQNQRHHLSPPKKQMNKGSPYSPSAGKRAVCTVITIFLLLAGITLLVLWLVYRPHKPRFTVVGAAIYGLNTTAPPLMSTALQFNILIRNPNKRVTIIHNSLSFEGASQKGQLLNPAQACVWKMQAEEQSNMETQSSQHAQIIEISGDILPDVRRNICEEAPCGFSNAGSISKDSEERSTSMRKLLMAVVLCVIFMSIEVVGGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEANPRQSYGFFRIEILGALVSIQLIWLLAGILEMEHKCTRGLSTCTWGLNPECWGTTINMLRNILEVLMESTPREIDAAKLEKGLLDMEEVVAVHELHIWAITVGKVLLACHVKIRPQVDAELVLEKVIDYIRTVHNITHVTIQIER 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00052 391 NCBIfam cation diffusion facilitator family transporter 189 278 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Sebi472g00052 391 Gene3D Cation efflux protein transmembrane domain 188 286 IPR027469 -
Sebi472g00052 391 PANTHER CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 144 278 - -
Sebi472g00052 391 MobiDBLite consensus disorder prediction 1 31 - -
Sebi472g00052 391 Pfam Cation efflux family 192 276 IPR002524 GO:0006812|GO:0008324|GO:0016020|GO:0055085
Sebi472g00052 391 SUPERFAMILY Cation efflux protein transmembrane domain-like 186 276 IPR027469 -
Sebi472g00052 391 MobiDBLite consensus disorder prediction 10 29 - -
Sebi472g00052 391 SUPERFAMILY Cation efflux protein cytoplasmic domain-like 319 390 IPR036837 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00052 Sebi-Chr472 584877 594045 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00052 289 391 Inorganic Solute Cotransporters AT2G46800 79.612 3.41e-49 169
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00052 K14689 - gmx:100794876 238.81