Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00048 ATGTTACCTTTTGGAAGATGGATACTTCACGATTGGAGTGATGAGCATTGCTTGAAGCTTTTGAAGAATTGCTATGATGCTATTCCTGATGATGGGAAAGTGATTGTGGTGGAGGCAGTTCTTCCTATTATTCCTGAGAATAATGCTGCTTGGAAATGTGTCTCCCAATCCGATGTTGTGATGATGACTCAAAACCCAGGAGGGAAAGAGCGATCTGAGCAACAATTCATGGAACTGACAACTGCAGCTGGATTTAGTGGCATTAGATATGAATGTCGTGTCCGTACCTTCTGGGTTATGGAGTTCTTCAAGTAA 315 0.4222 MLPFGRWILHDWSDEHCLKLLKNCYDAIPDDGKVIVVEAVLPIIPENNAAWKCVSQSDVVMMTQNPGGKERSEQQFMELTTAAGFSGIRYECRVRTFWVMEFFK 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00048 104 Pfam O-methyltransferase domain 6 86 IPR001077 GO:0008171
Sebi472g00048 104 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 104 IPR016461 GO:0008168
Sebi472g00048 104 Gene3D Vaccinia Virus protein VP39 6 94 IPR029063 -
Sebi472g00048 104 PANTHER O-METHYLTRANSFERASE 6 89 IPR016461 GO:0008168
Sebi472g00048 104 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 102 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00048 Sebi-Chr472 553040 553426 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00048 4 104 Monolignol Biosynthesis Gene Families AT5G54160 48.515 2.21e-33 116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00048 K13066 - gmx:100803633 189.889