Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00047 ATGGCCAACCTTTCTAATTCGAAGATTGTTGAATGTGACGGTGAAGACCACAAGAAATTAGAAGATGAAGAATGCTTCACATATGCTATGCAGCTTTGCAACTCTGTTGTTCTTCCCATGGCACTGAAATCCGCAACTGAGCTGGGCGTATTTGACGTCTTGCAAAAAGCGGGTACAGATGCTAAGCTCTCTGCAAAGGAGATTGCATCCCAGCTTTCCTGCAGCAACCCAGAAGCAGCCGCAATGTTAGATCGCATCCTCGCCCTTCTTGCCTCCCACTCTGTGCTTCACTGCTCTGTTCTTCCCGATGAACAAAACCTTGGAATTGGATCCTTTCACAGACTCTACAGCATCACCCCTGTCGCCAGATTCTTCGCTCGCAATTCGGATGGTGTTTCATTAGGACCCTTGTTGGCCTTGCTTCATGATAACATCTTCCTAGCTAGCTGGTCCCAGCTGAAGGATGCGATTCGGGAAGGGGGAATTCCATTCAACAGGGTTTATGGCACACATGCCTTTGAGTATCCGAGCTTGGACTCGAGGTTCAATCAACTCTTTAATACAGCAATGATCAATCACACCACTTTAATCATGAAGAAGGTTCTTGAATGCTACAGTGGTTTGAAGGGCATAAAAAGGCTTGTGGATGTTGGTGGTGGTCTTGGGATCAACATTAACATGATCACTTCCAAATATCCTCATATCCAGGGTATCAATTTCGACTTGCCTCATGTCATTCAACATGCCCCTTCCTATCCTGGTATGACCTTTACTCTATTACTTGTTCTAATTAATCCTGGGGAAAGAAAGATCGACAATTAA 822 0.4513 MANLSNSKIVECDGEDHKKLEDEECFTYAMQLCNSVVLPMALKSATELGVFDVLQKAGTDAKLSAKEIASQLSCSNPEAAAMLDRILALLASHSVLHCSVLPDEQNLGIGSFHRLYSITPVARFFARNSDGVSLGPLLALLHDNIFLASWSQLKDAIREGGIPFNRVYGTHAFEYPSLDSRFNQLFNTAMINHTTLIMKKVLECYSGLKGIKRLVDVGGGLGININMITSKYPHIQGINFDLPHVIQHAPSYPGMTFTLLLVLINPGERKIDN 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00047 273 Pfam O-methyltransferase domain 150 252 IPR001077 GO:0008171
Sebi472g00047 273 SUPERFAMILY "Winged helix" DNA-binding domain 21 128 IPR036390 -
Sebi472g00047 273 PANTHER O-METHYLTRANSFERASE 29 252 IPR016461 GO:0008168
Sebi472g00047 273 FunFam Caffeic acid 3-O-methyltransferase 8 125 - -
Sebi472g00047 273 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 130 257 IPR029063 -
Sebi472g00047 273 Gene3D Vaccinia Virus protein VP39 126 260 IPR029063 -
Sebi472g00047 273 Gene3D - 10 125 IPR036388 -
Sebi472g00047 273 Pfam Dimerisation domain 40 91 IPR012967 GO:0046983
Sebi472g00047 273 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 30 273 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00047 Sebi-Chr472 545187 546124 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00047 19 255 Monolignol Biosynthesis Gene Families AT5G54160 51.055 3.24e-83 252
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00047 K13066 - gmx:100803633 385.185