Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00039 ATGGAATGTTCAGGCAGAGCTTGTGCACTGCAGATGGGCAATGTTGGGTGCTGCTGGCATTTTCATTCCAGAATTCCTAACAAAGATTGGCATCTTAAACCACCCCCTCATGTTGAGCTCATTTTCATTGGCTGGGCTGAGGGTAGAAGGTGGGCTGACATAATCAAGCCAGGCTGTGTCAACACTGACCCTATCTTTCCCAACAACAAGCTCACAGGGACTGATGTTGGTTACCCAGGTGGGCTTTGGTTTGACCCCCTTGGATGGGGAAGTGGTTCTCCTGAGAAGATCAAGGAGTTGAGAACAAAGGAGATCAAGAATGGGAGATTGGCCATGTTGGCTGTCATGGGTGCATGGTTCCAGCACATATACACTGGCACTGGTCCTATTGACAACCTCTTTGCCCACCTTGCAGATCCTGGCCATGCCACCATTTTTGCTGCTTTCACACCCAAGTGA 459 0.4967 MECSGRACALQMGNVGCCWHFHSRIPNKDWHLKPPPHVELIFIGWAEGRRWADIIKPGCVNTDPIFPNNKLTGTDVGYPGGLWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAVMGAWFQHIYTGTGPIDNLFAHLADPGHATIFAAFTPK 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00039 152 SUPERFAMILY Chlorophyll a-b binding protein 36 150 - -
Sebi472g00039 152 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 38 150 IPR001344 GO:0009765|GO:0016020
Sebi472g00039 152 Pfam Chlorophyll A-B binding protein 38 122 IPR022796 -
Sebi472g00039 152 Gene3D Chlorophyll a/b binding protein domain 21 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00039 Sebi-Chr472 425222 425826 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00039 38 152 Chloroplast and Mitochondria Gene Families AT3G61470 95.652 1.84e-77 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00039 K08908 - cpap:110815937 249.98