Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00034 ATGACAATGATGAGCAGCAACAAAAACAACGTTGGACAGTTTGGAGATACAACGCTGACCAAAGTGTTTGTGGGAGGGCTAGCGTGGGAAACCCCGAAAGAAACATTGAGAGAGCACTTTGAAAAGTTCGGTGAGATCCTTGAAGCCGTCATCATTTCTGATAAGCTCACCGGCAGATCCAAAGGCTACGGCTTTGTAACGTTCAAGGAAGCAGAGGCGGCGAAGAAGGCTTGCGAGGAACCAACTCTGATTATCAATGGGCGCCGAGCCAACTGCAATCTGGCATCGCTGGGTGCACGCCGTCCAACCAGGTCGTCCTCTTCCCCTCAGACACAAGGAACGAGGATTAATGCCAACCAGGTTCAGTGGTATTATCCCGTGGCAACACCTGCACCTGCTTCCCCATTCCATCATCACGCCTTTCCTTTCTACGGGTACACGCCCACTTACATTGCAGCAGACGTAAATTACAATTACAATCAGAAGGTGAACTATGGAAGTGGCTACGGGTACATGAATGGGCATGTGTACCCAAACCCTGCAAGCCAGGCACAGGCAATTGTGGGCGCAAATACATTGATGCCAATGTCAATGTACCCTGCAGTCTACCACTTCCACCGAACCGAGACAATGGGCGTACCTGCTGCCCACTTCTTCCACCCAACCATACCCATCACTCCCTCAGGTGCGCCACATCCTCATCCTACCTACCTTCCTAACTTCAAAAATCTCATTTAA 738 0.5041 MTMMSSNKNNVGQFGDTTLTKVFVGGLAWETPKETLREHFEKFGEILEAVIISDKLTGRSKGYGFVTFKEAEAAKKACEEPTLIINGRRANCNLASLGARRPTRSSSSPQTQGTRINANQVQWYYPVATPAPASPFHHHAFPFYGYTPTYIAADVNYNYNQKVNYGSGYGYMNGHVYPNPASQAQAIVGANTLMPMSMYPAVYHFHRTETMGVPAAHFFHPTIPITPSGAPHPHPTYLPNFKNLI 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00034 245 FunFam Putative RNA-binding protein ARP1 14 102 - -
Sebi472g00034 245 SUPERFAMILY RNA-binding domain, RBD 16 114 IPR035979 GO:0003676
Sebi472g00034 245 SMART rrm1_1 21 93 IPR000504 GO:0003723
Sebi472g00034 245 Gene3D - 3 114 IPR012677 -
Sebi472g00034 245 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 22 88 IPR000504 GO:0003723
Sebi472g00034 245 PANTHER BOULE-RELATED 8 222 - -
Sebi472g00034 245 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 20 97 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00034 Sebi-Chr472 356715 358040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00034 16 150 C2H2 Transcription Factor Family AT2G19380 32.667 3.57e-17 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00034 - - lang:109337745 285.034