Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00031 ATGCTGGAGGTTCGAAGGTTGCTGCTGATGCTGTTCATCAGCACTTGCATTCTTCGTTGGATGCCCAATGGTGTCACTGCCACAGATCCAAATGATGTTGCTGCTGTGAAGGCTATGTTTCAAAGCATGAACTCACCATCCCAGCTAGGTTGGCCTGCTAATGGTGATGATCCCTGTGCACAGTCCTGGAAAGGCATCACTTGTTCAGGCAACCGTGTTACAGAGATTAAGTTATCTAATCTTGGACTAACTGGAACATTGGCCTATGGATTACAAGCTTTAACATCTGTGACCACCCTAGACATGAGTAACAACAATCTTGTAGGAACTATACCATACCAACTTCCTCCAAATGTGCAGCGCCTAAATCTTGCTTATAATAACCTTACTGGGACAGTTCCTTACTCAATTTCTAGCATGGCCTCTCTTACAGACCTGAATCTCGGTCACAATCAGCTCCAGCAAGGACTGGGTGTCGACTTTCAAAATCTTTCTTCCCTCTCCAAATTGGATCTCTCTTTCAATTCTCTGACAGGTGACCTCCCTCAGACCATGAGCTCACTCACAGGCATAAAAACCATGTATCTGCAAAGCAACCAGTTTACAGGCACTATTGATGTCCTTGCTAATCTGCCCCTGGATAGTCTGAATGTGGAAAACAATCATTTTACAGGATGGATACCAGAACAGTTGAAAAACATTGACCTACAGACTGGTGGCAATGCATGGAGCTCAGGACCTGCACCCCCACCTCCTCCTGGGACACCTCCAGCACCTAAGAGCAACCAACACCATAAATCTGGTGGTGGAAGTACCACTGTCCAAGATGCTGGCAGTGGCACAATTGATGAGGGCAAAAAATCTGGAATAGGGGTTGGTAGCATAGCTGGAATTGTGATCTCCATCATTGTTGTTGGGGCAATAGTAGCATTCTTTTTGGTGAAGAGAAAATCCAAGAAGTCATCTTCAGATTTAGAAAAGCTGGGCAATCAGTCCTTTGCTCCTCTTCCTTCAAATGAAGTGCATGAAGCAAAGTCTGTGCAAACTACTACCTCTGTAATTGACTTGAAGACGTTTGATACTTCTGCCTCAATAAATCTTAAACCTCCACCTATTGATCGTCATAAATCATTTGATGACAATGAATTCTCAAAGAAGCCTGCTGTTGTTAAGAAGACTGTAACAGCTCCTGCAGATGTGCAATTGTATTCTATTGCTGATCTGCAGATTGCTACTGGTAGCTTCAGTGTGGATTATCTTGTTGGTGAGGGATCTTTTGGGCGCGTTTACCGTGCTCAGTTCGATGATGGAAAGGTTCTTGCAGTGAAGAAAATAGATTCATCTGTCCTTCCCAGTGATTTGTCAGAAGATTTTACAGAAATAGTGTCAAACATCTCCCATTTACATCATCCAAATGTGACAGAGCTTGTAGATGAATATAGTAAACCATTGATATGGAATTCCCGTGTCAAGATAGCTTTGGGGACTGCGCGAGCTTTAGAGTACCTACATGAAGTTTGTTCGCCGTCAGTTGTTCATAAGAATATTAAATCAGCCAATATATTACTTGATACAGAGCTTAATCCTCATCTTTCAGACAGTGGATTGGCAAGCTATATTCCAAATGCGGACCAGATATTGAACCAAAATGTTGGATCTGGATATGATGCCCCTGAAGTTGCCTTGTCTGGTCAGTATACTCTGAAAAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTCAGTGGACGGAAACCATTTGATAGCACAAGGCCAAGATCCGAGCAGTCTTTGGTTAGATGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCACTGAAAGGGCTATATCCTGTTAAATCTCTTTCTCGTTTTGCCGATGTTATTGCTCTTTGCGTTCAGCCGGAGCCTGAATTCCGACCACCCATGTCAGAAGTGGTTCAAGCACTGGTACGGTTAGTACAGCGAGCTAACATGAGCAGGCGAACAACATTTGGAAGTGATCATGGATCCAACAGAGGGAGTGATGAGCCAGCCATCAGAGACATCTAA 2079 0.4377 MLEVRRLLLMLFISTCILRWMPNGVTATDPNDVAAVKAMFQSMNSPSQLGWPANGDDPCAQSWKGITCSGNRVTEIKLSNLGLTGTLAYGLQALTSVTTLDMSNNNLVGTIPYQLPPNVQRLNLAYNNLTGTVPYSISSMASLTDLNLGHNQLQQGLGVDFQNLSSLSKLDLSFNSLTGDLPQTMSSLTGIKTMYLQSNQFTGTIDVLANLPLDSLNVENNHFTGWIPEQLKNIDLQTGGNAWSSGPAPPPPPGTPPAPKSNQHHKSGGGSTTVQDAGSGTIDEGKKSGIGVGSIAGIVISIIVVGAIVAFFLVKRKSKKSSSDLEKLGNQSFAPLPSNEVHEAKSVQTTTSVIDLKTFDTSASINLKPPPIDRHKSFDDNEFSKKPAVVKKTVTAPADVQLYSIADLQIATGSFSVDYLVGEGSFGRVYRAQFDDGKVLAVKKIDSSVLPSDLSEDFTEIVSNISHLHHPNVTELVDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDTELNPHLSDSGLASYIPNADQILNQNVGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFDSTRPRSEQSLVRWATPQLHDIDALAKMVDPALKGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSDHGSNRGSDEPAIRDI 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00031 692 MobiDBLite consensus disorder prediction 670 692 - -
Sebi472g00031 692 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Sebi472g00031 692 Gene3D Transferase(Phosphotransferase) domain 1 478 682 - -
Sebi472g00031 692 Gene3D Phosphorylase Kinase; domain 1 377 477 - -
Sebi472g00031 692 Pfam Leucine rich repeat N-terminal domain 31 69 IPR013210 -
Sebi472g00031 692 SUPERFAMILY L domain-like 28 233 - -
Sebi472g00031 692 MobiDBLite consensus disorder prediction 237 286 - -
Sebi472g00031 692 Pfam Leucine rich repeat 96 153 IPR001611 GO:0005515
Sebi472g00031 692 ProSitePatterns Protein kinases ATP-binding region signature. 421 444 IPR017441 GO:0005524
Sebi472g00031 692 SUPERFAMILY Protein kinase-like (PK-like) 398 659 IPR011009 -
Sebi472g00031 692 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 467 673 - -
Sebi472g00031 692 ProSiteProfiles Protein kinase domain profile. 415 662 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi472g00031 692 MobiDBLite consensus disorder prediction 245 259 - -
Sebi472g00031 692 Gene3D Ribonuclease Inhibitor 29 248 IPR032675 -
Sebi472g00031 692 MobiDBLite consensus disorder prediction 325 344 - -
Sebi472g00031 692 Pfam Protein kinase domain 491 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi472g00031 692 MobiDBLite consensus disorder prediction 260 279 - -
Sebi472g00031 692 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 379 480 - -
Sebi472g00031 692 MobiDBLite consensus disorder prediction 324 344 - -
Sebi472g00031 692 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 8 478 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00031 Sebi-Chr472 310496 318503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00031 1 672 Strubbelig Receptor Gene Family AT3G14350 66.520 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Sebi472g00031 Pkinase 4.5e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00031 - - gmx:100807707 1097.42