Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00019 ATGACCAAGATCAAACAAGCCTCCAATAATAAGAAGAAGAAGCTGATCTTCTTCTCTCTCTTTGCTACTTTGCTACTTTGCAACAATGCCGAGTCCTCCTCCCCATCCCATGTCATCATAAAAAACGCTTGCAGCAACACATTGTACCCAGAATTGTGCATCTCAACAATAGCCTCTGAACCTCGACTTGCCAAGAAAGTTTCCAGTCACAAAGATGTGGTAGAGTTGTACTTGAACGTAACCACCGGAATTGTTCAGCGCAATTACTTCACCGTAGAGAAGCTCTTAACCAGAAAGGGCCCCACCCTCACCAAGAGGCAGAAAACCGCCCTCCATGATTGCTTGGAAACCATTGATGAGACCCTCTATGAGCTAGGAAAGGCCAAGGATGACCTCAGAGATTACCCATCGAAAAAGTCTCTGTCTCAGCACGCGAATGATCTCATAACTCTGATGAGTTCCGCCATAACATACCAAGATACTTGCTTGGATGGTTTCTCTCATGATGAGGCTGATAGAAAGCTCAGGAAATATCTGGAGAAAGGGGAACTGCATGTGGAACACTTGTGCAGCAACGCATTGGTTATGATCAAGAACCTCACCGACACTGACATAGCTAATTCCCAGAACAACAGGAAACAACTGATGGAGCAGGAGGAGGATGGGATCAAGTGGCCCGAGTGGATTTCCGCCGCGGACAGGCGCCTTCTACAGGCGGCTGCGGTGACTCCTGACGTGGTCGTGGCGGCGGACGGCAGCGGGAACTTCAAGACAGTGTCAGCTGCGGTGGCTGCAGCTCCAGAGAAGAGTAACAAGAGATATGTAATCAAAATAAAAGCAGGGGTGTACAGAGAGAATGTGGATGTGCCAAAGACGAAGACGAATATCATGTTTGTGGGTGACGGCAGAACCAACACGATCATCACAGCAAGTAGAAATGTTGTCGATGGCAGCACTACCTTCAACTCTGCCACAGTGGCCGTAGTGGGAGAACGATTCTTGGCACGAGACATAGGTTTCCAAAACACAGCAGGTCCCTCAAAGCACCAAGCAGTGGCCCTTCGAGTTGGTGCTGACCTCTCTGCCTTCTATTTGTGTGACTTCCTTGCATACCAAGACACCCTTTATGTCCACAGCAATCGCCAATTCTTTGTCAAGTGCTTCATTGCAGGCACTGTCGACTTCATCTTTGGCAATTCAGCTGTTGTGTTCCAAGACTGTGACATCCACGCCAGGCGTCCTAATTCAGGGCAAAAGAACATGGTGACCGCACAAGGCCGTGTTGACCCTAACCAAAACACAGGCATTGTGATCCAAAAATGTAGGATTGGTGCCACCAAGGATTTGGAACCTGTCAAGAGCAGCTTCCCTACGTTTCTTGGGAGGCCATGGAAGGAGTACTCTAGGACTGTCATCATGCAATCAACCATAAGTGATGTCATTAACCCTGCTGGCTGGCATGAATGGGATGGCAATTTTGCTTTGAATACCTTGTTTTATGGGGAGTATCAGAACACTGGTGCTGGTGCTGCCACCTCTGGAAGGGTTAAATGGAAAGGGTTTAAGGTCATTACTAGTGCTTCTGAGGCCCAAGCTTTTACTCCTGCCAATTTCATTGCAGGTTCTAGTTGGTTGAGCTCTACTGGATTCCCATTCTCTCTTGGCCTATAA 1671 0.4811 MTKIKQASNNKKKKLIFFSLFATLLLCNNAESSSPSHVIIKNACSNTLYPELCISTIASEPRLAKKVSSHKDVVELYLNVTTGIVQRNYFTVEKLLTRKGPTLTKRQKTALHDCLETIDETLYELGKAKDDLRDYPSKKSLSQHANDLITLMSSAITYQDTCLDGFSHDEADRKLRKYLEKGELHVEHLCSNALVMIKNLTDTDIANSQNNRKQLMEQEEDGIKWPEWISAADRRLLQAAAVTPDVVVAADGSGNFKTVSAAVAAAPEKSNKRYVIKIKAGVYRENVDVPKTKTNIMFVGDGRTNTIITASRNVVDGSTTFNSATVAVVGERFLARDIGFQNTAGPSKHQAVALRVGADLSAFYLCDFLAYQDTLYVHSNRQFFVKCFIAGTVDFIFGNSAVVFQDCDIHARRPNSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATKDLEPVKSSFPTFLGRPWKEYSRTVIMQSTISDVINPAGWHEWDGNFALNTLFYGEYQNTGAGAATSGRVKWKGFKVITSASEAQAFTPANFIAGSSWLSSTGFPFSLGL 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00019 556 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Sebi472g00019 556 PANTHER PECTINESTERASE 27 546 - -
Sebi472g00019 556 FunFam Pectinesterase 239 556 - -
Sebi472g00019 556 SMART PMEI_2 35 196 IPR006501 GO:0004857
Sebi472g00019 556 Pfam Pectinesterase 245 541 IPR000070 GO:0030599|GO:0042545
Sebi472g00019 556 Pfam Plant invertase/pectin methylesterase inhibitor 40 196 IPR006501 GO:0004857
Sebi472g00019 556 FunFam Pectinesterase 36 201 - -
Sebi472g00019 556 NCBIfam pectinesterase inhibitor domain 16 201 IPR006501 GO:0004857
Sebi472g00019 556 Gene3D - 239 556 IPR012334 -
Sebi472g00019 556 CDD PMEI-like_3 43 201 - -
Sebi472g00019 556 Gene3D Invertase/pectin methylesterase inhibitor family protein 37 202 IPR035513 -
Sebi472g00019 556 SUPERFAMILY Pectin lyase-like 240 555 IPR011050 -
Sebi472g00019 556 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 39 201 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00019 Sebi-Chr472 213722 216463 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00019 28 556 Carbohydrate Esterase AT3G14310 70.054 0.0 777
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00019 K01051 - qsa:O6P43_018475 835.099