Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi472g00014 ATGTGGTGGAGATCAGCATCATTCATCTTGGACAGGCAGCAACAGAACGACAGGCCCGATTCGTCGCTGTCCATCTCTCCTCCTCCGCTTGAAACCGAATCCTCAATGGGCGAAAACCCTAACCCTAAGATTTCCGCTTACTATCAGACGAGAGCGGCGCATCATGGTGTGGTGACCAGCGACTGGCTGGCTCAAGCTCAAGCTGCCATTGGCCAGGACTCTGAACCTGAACCTCACCCACAAGTTAGGGTCGATCCCGATAAACCCTTCAGCGTCATAGATGAATTTAATAACTGGCGGAAACAGCCCCATTTGGCCGAGGCCGTCGCCGCTATTCGCGCCTTGGCTGCCGTCATCATGTCCAGCCAGGCTTCCACCATGATGCAACTCGAAATTGAGCTCAAGAACGCCTCCGATTCTCTCAAATCCTGGGATACAACCTCTATCTCTTTGACAGCAGGTTGTGATCTGTTTATGCGATATGTGACTAGGACCTCTGCTTTAGAATATGAAGACTTCAATTCTGCAAAGTCTCGCCTAATTGAACGTGCCGACAAGTTTGGGGAAATCTCCTACAAGGCTCGGAAAATTATTGCAATGTTGAGTCAGGAATTTATATTTGATGGTTGTACAATTTTGGTTCATGGTTATTCCAGAGTTGTCTTTGAAGTTCTAAAACTGGCAGCACAAAATAAGAAACTGTTTCGCGTCTTCTGCACAGAGGGAAGACCAGACCGAACGGGATTACGGTTGTCCAATGAACTGGCCAAGCTTGATGTTCCGGTTAAACTTTTAATAGACTCCGCAGTTGCATATTCTATGGATGAGGTGGACATGGTTTTTGTGGGTGCAGATGGAGTTGTCGAAAGTGGGGGCATAATTAACATGATGGGGACATACCAAATTGCATTGGTTGCACATAGTATGAATAAACCAGTTTATGTCGCTGCTGAAAGCTACAAGTTTGCTCGTCTTTACCCTCTTGACCAAAAGGATCTGGCCCCTGCCTTACGCCCTATTGATTTTGGGGTACCCATTCCGTCGAAGGTAGAGGTTGAAAGGTCTGCGCGGGACTACACCCCTCCTCAATATCTGACTCTGCTTTTCACAGATTTAGGTGTTCTTACTCCATCTGTTGTTAGTGATGAGCTGATCCAGCTATATTTATAG 1170 0.4709 MWWRSASFILDRQQQNDRPDSSLSISPPPLETESSMGENPNPKISAYYQTRAAHHGVVTSDWLAQAQAAIGQDSEPEPHPQVRVDPDKPFSVIDEFNNWRKQPHLAEAVAAIRALAAVIMSSQASTMMQLEIELKNASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFNSAKSRLIERADKFGEISYKARKIIAMLSQEFIFDGCTILVHGYSRVVFEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYSMDEVDMVFVGADGVVESGGIINMMGTYQIALVAHSMNKPVYVAAESYKFARLYPLDQKDLAPALRPIDFGVPIPSKVEVERSARDYTPPQYLTLLFTDLGVLTPSVVSDELIQLYL 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi472g00014 389 Gene3D - 193 389 IPR042529 -
Sebi472g00014 389 Coils Coil 127 147 - -
Sebi472g00014 389 MobiDBLite consensus disorder prediction 13 43 - -
Sebi472g00014 389 FunFam Translation initiation factor eIF-2B subunit alpha 88 190 - -
Sebi472g00014 389 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 54 389 - -
Sebi472g00014 389 FunFam Translation initiation factor eIF-2B subunit alpha 193 389 - -
Sebi472g00014 389 Gene3D - 89 190 IPR042528 -
Sebi472g00014 389 Pfam Initiation factor 2 subunit family 104 377 IPR000649 GO:0044237
Sebi472g00014 389 SUPERFAMILY NagB/RpiA/CoA transferase-like 98 388 IPR037171 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi472g00014 Sebi-Chr472 192088 194301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi472g00014 1 389 Eukaryotic Initiation Factors Gene Family AT1G53880 79.345 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi472g00014 K03239 - gmx:100799015 660.218