Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi471g00050 ATGATTGAATTGGTTGTTTTGGACGAACAGGGAGGTCGTATCCAATGCATGGTGAAGAGCATTCATGTGTATCTGTTTGAGAATAGTATCAACGAAGGTAATGTGTACATGCTAGAAAACCTCAGCGTTGCACTTAACAGTGGAAAGTACAAACCTACAATGCATGAATTTAGAATGTTCTTCAAGAGAGAGACACGAGTTACTCTGGTAGAAGATTCTTCCATTCCCCTCTATGGTTTTTCATTTGTCCCATTCGTTGAAATATTGAATGAAACTAAGGACGACAGACGTTTGGTTGATGTACTAGGTGTTGTTACTGGGAAAGGTAATCTGATTGAGTTCAAGAAAGAGGGAAAGCCATGCAACTATGTTGTCATAGAGTTGGAAAATATTGAGGGAGGTCTTAAACTTAGGTGTACTTTATGGGAGGACTATGCTTTTATGTTTTTGAAACATTTGGAAGACCATCCATCTGAGTCCTATGTTGTTGTTCTTCAATTTGCAAAAATGAAAAATTTTAAAGGTATTCAGTTTAGTCAGTTAAGTGATCATGCTTCTTTGACCCTTGAGGAAGAATTTCTTGAAAGAGGAGTGTACAAATCAATTGCTGATTTGAAAGAAGTAACACAGAATTCTGTTTTTGTAACAATTGGGACTGTTAAGGACATTGAGTCTGAATATAACTGGTGCTATCGTGCCTATAACATTATAGCTTCCTTTGAAAAGAAATACCAAATTGAAGAGGTAGCATTAATTCAAGACAACTCTGAACTTTTGAGTCAGTTTACTGAGTCCTCAGATCTGTTGAAGGTTCTTGATGTGGATCTTGCTGAGTATTGTGGAAATGCAAGTTTTGATACTCCCTCAAAATGCAAGGGTGAGATGCATTCTGAACAGACCATAGTTCGCGTTGCTGTTCATGGTGATGAACAATCTGCTAAGAAGCTGAGGAAAGTTATCAAGGAAGAGAAGAATTAG 978 0.3742 MIELVVLDEQGGRIQCMVKSIHVYLFENSINEGNVYMLENLSVALNSGKYKPTMHEFRMFFKRETRVTLVEDSSIPLYGFSFVPFVEILNETKDDRRLVDVLGVVTGKGNLIEFKKEGKPCNYVVIELENIEGGLKLRCTLWEDYAFMFLKHLEDHPSESYVVVLQFAKMKNFKGIQFSQLSDHASLTLEEEFLERGVYKSIADLKEVTQNSVFVTIGTVKDIESEYNWCYRAYNIIASFEKKYQIEEVALIQDNSELLSQFTESSDLLKVLDVDLAEYCGNASFDTPSKCKGEMHSEQTIVRVAVHGDEQSAKKLRKVIKEEKN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi471g00050 325 Gene3D - 1 73 IPR012340 -
Sebi471g00050 325 SUPERFAMILY Nucleic acid-binding proteins 2 73 IPR012340 -
Sebi471g00050 325 SUPERFAMILY Nucleic acid-binding proteins 80 191 IPR012340 -
Sebi471g00050 325 CDD RPA1_DBD_A_like 2 67 - -
Sebi471g00050 325 CDD RPA1_DBD_B_like 100 175 - -
Sebi471g00050 325 Gene3D - 74 200 IPR012340 -
Sebi471g00050 325 Pfam Domain of unknown function DUF223 3 94 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi471g00050 Sebi-Chr471 474844 477298 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi471g00050 6 195 Core DNA Replication Machinery Family AT2G06510 25.641 1.38e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi471g00050 - - adu:107477146 244.202