Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi471g00010 ATGCCTTCTTCAAGTTCAACCCACTCTAATTCTACTACTGGCCCTGCTACTTCTTCATACAGAGGTGTTCGAAAGAGGAAATGGGGGAAATGGGTCTCTGAAATCCGTGAACCTGGCACTAAGACCAGAATTTGGTTAGGAAGCTTCGAGACTCCTGAGATGGCTGCTGCTGCATACGACGTCGCTGCGTTGCATTTCAGGGGACGTGAAGCCAGGCTTAACTTCCCTGAACTCGCAACTACTCTTCCTCGTCCTATAAGCAACAATGCTGACCACATACGCATGGCGGCGCATGAGGCTGCTTTGAGGCTTAGGACCAACACGGTGGCGCCGGAGACTGGTGGCTCTGCCGGTTCAACCACCGGGGCACCACTGACGGTTAGACTCTCCCCGACTCAAATTCAGGCTATCAATGACTCGCCTCTTGACTCACCACCGACGTGGATGCAAATGTCACATCCTTTCATGTTTGATGATCAGTCCATGATGTTTGCGAATGGGTATGAGTTTGAGGAAAACGAGTGGGAGGATATACACACTGAATCTCTTTGGGATCCTTAA 561 0.5062 MPSSSSTHSNSTTGPATSSYRGVRKRKWGKWVSEIREPGTKTRIWLGSFETPEMAAAAYDVAALHFRGREARLNFPELATTLPRPISNNADHIRMAAHEAALRLRTNTVAPETGGSAGSTTGAPLTVRLSPTQIQAINDSPLDSPPTWMQMSHPFMFDDQSMMFANGYEFEENEWEDIHTESLWDP 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi471g00010 186 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Sebi471g00010 186 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Sebi471g00010 186 MobiDBLite consensus disorder prediction 1 21 - -
Sebi471g00010 186 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Sebi471g00010 186 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Sebi471g00010 186 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Sebi471g00010 186 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 6 119 - -
Sebi471g00010 186 SUPERFAMILY DNA-binding domain 18 77 IPR016177 GO:0003677
Sebi471g00010 186 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Sebi471g00010 186 CDD AP2 18 78 IPR001471 GO:0003700|GO:0006355
Sebi471g00010 186 FunFam Ethylene-responsive transcription factor 2 18 77 - -
Sebi471g00010 186 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi471g00010 Sebi-Chr471 56142 56702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi471g00010 18 186 AP2-EREBP Transcription Factor Family AT1G71450 61.765 1.07e-65 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi471g00010 AP2 1.9e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi471g00010 - - gmx:100815719 317.39