Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi471g00009 ATGAACGAGTTTGGCGAAGGATGTAGCAGGATGAATGGGGAGGAGCCAATGATGGAGGCATTGAATGATTTGAGGTTGGAATCAGAAGAGGTGCGTAGTGGTGAAGACACGGAAGGTGATTTGGTTGTGAACGATGAAGAAGAAGCAGAGGATGAGGGGGGAGGTTTTCAGTATAGGTGTGTTGAGGATAACGGCGAAAACAATGATGGTGAACGTATAGAAATTAATAATGTTGGGGATATAGTGAAGTTGGATTTAAAGAATTTAAGCCCGCATGAGGTTGGTTTATATTATGATTTTCAGAGTTTGGAATTGGCTGCCGATTTTTATAAAAGTTACGCAAGGAAGAACGGCTTTGCTGGTCGTGAGGGTAAGAAAAGGCACAATAAAGATGGAGTTGTGATACAACAAGCGTTTGTTTGCAACAGGGAAGGATTCAGAAGAGAGAGAGATGGTGGCACCCCGTCACAACGAAAACGACGTGCTAATACGAGGTGTGGCTGTAAGGCAGAATTCCGTGTGCATGTTAATGTGTTGTCTGGTAGGTGGTATGTGACATGGTTTGACGATGATCATAACCATGATCTGATGTCGGATGCTCATTGCGGGATGTTACCCGCTCATCAAAAGATGAGTAAAGGTCATGTTATGCAAATGAACAATTTCTTGAAGGCAGGTATACGTCCACCACACATATTGGCTGCATTCGCTCGTCAGGCAGGGGGGTATGAGAAGGTAGGGTTTCGTAAAAAGCACATGTACAACCAGATTGGTCAGCAAAGGCGTAACCAAGGCGATGATGGGAAAAGTGCTATAGGCTATCTACAATGGTTGGGCTTAAAGGATTCCCTAATGTGCTGTAAACACGTAGAAGATGCAAATGGGAGCGTCAGACACATGTTTTGGTCTAATGGTCTAAGCCAGATTAGCTACCAAGAATTCGGTGATGTTTTAGCATTTGATGCTACTTACCGTAAGAACAAGTATCGATATCCCGTGGTTATATTTTCAGGTGTCAATCACCATAACCACACAACTATTTTTGCATGTGGGATAGTTTCAAATGAGACAGAAGAGACTTATGTTTGGTTATTGGAACAGTTCAATGCAGTAATGAAAGGCAAGTCCCCGGTTTCTGTAATCACTGATGGGGATTTGGCGATGAGGAATGCTATCAAAAGGGTTTATCCAAACGCCCACCATCGGTTGTGTGCATGGCACCTTATTCGCAATGCAACAAGTAATGTGTCTAATCCGGGCTTCACTGCTGCATTTACAAGGTGTATGTTGGGTGACTATGACATTGGACAATTTAAGAGAAAGTGGCCAACAATGGTGAATCAGTTTGGGTTACAAGAAAATAGGTGGGTGAGGGAAATGTATGATAAAAGAAAGATGTGGGCAACTGCTTATATCCGTGGGAATTTTTTTGCAGGGTTCAGAACAACTTCCCGTTGTGAAGGATTGCATTCTCAAATACGTAAGTACGTTCACTCACAAAGCAGCCTGACAGAATTTGTCCAGCAGTTCCAACGCTGCTTGTATGAAATGCGGTTCAGGGAAGCGGAAGCTGATTTTGCCTCGGTACATGGGGAGCCTGAATATCATGGTCAATTACGAAGCCTGCAAATATCTGCTACCAAGCTATTTACTAGGGAGATGTTTGATATTTTCCTTCCTGTGCTTGACAGAGCTGCTATATTGAAAGTGACTGGGCAGAGGGAGAATTACCCAAGTGTGATATATGTGGTGCAAAAATACCAAGTTGATGAGAAGGAGTGGTATGTGACTTGTAACCTATTGAGCAATGAATATAGGTGTTCATGTCTAAGAATGGAGTCTTATGGCATGCCATGTGACCATATGATTGCTGTGTTAGTGTACCTAAATATAAGTGAGGTTCCGAAATGTATGGTTATGCAAAGATGGTGCAGGGGAGCTAAGTCTGTACTATGTGGTGAGCTTGGTCAAGGATCAAATTTCTGGGACACAGAATCTGTTGGCAGATTTGCTTCCTTGTTGGATGTATATTATAATGTGTGTAGACTGGCTAGTAAGAGTGTTGATGACTACAATGAGCAGTATGAGAAGGGCATGAATGATTATAACCATTTGAAGGAGAAGAATGGGCATGTAAGTGATGATGAAGAAAGTCGAAGGCAGGGTGGGAATGGTGGTGTTAGAGGTGGAAGGATTCAGAGAGGTAGGGGACGTATAGGGAGTACCTCATCAACTCCACGGTTGTGGTCAAAGCGAACCACCCATTGCAGTTTGTGTCATGTGGCTGGTCACAATAGGTTAACTTGTCCCCTTCGGGAACAACTTAGTGAGATGATTGAGCAAATGTATGGGACTTCTATACCCCATGGAGATGTAGATCTTTCTTTTAGCAATGAGGACTTCAATATGTCTTGGGAGTGGATTGGGTTTGCAGCATGGACATCGTGTGATAGTAGTGGAGTGTGA 2466 0.4319 MNEFGEGCSRMNGEEPMMEALNDLRLESEEVRSGEDTEGDLVVNDEEEAEDEGGGFQYRCVEDNGENNDGERIEINNVGDIVKLDLKNLSPHEVGLYYDFQSLELAADFYKSYARKNGFAGREGKKRHNKDGVVIQQAFVCNREGFRRERDGGTPSQRKRRANTRCGCKAEFRVHVNVLSGRWYVTWFDDDHNHDLMSDAHCGMLPAHQKMSKGHVMQMNNFLKAGIRPPHILAAFARQAGGYEKVGFRKKHMYNQIGQQRRNQGDDGKSAIGYLQWLGLKDSLMCCKHVEDANGSVRHMFWSNGLSQISYQEFGDVLAFDATYRKNKYRYPVVIFSGVNHHNHTTIFACGIVSNETEETYVWLLEQFNAVMKGKSPVSVITDGDLAMRNAIKRVYPNAHHRLCAWHLIRNATSNVSNPGFTAAFTRCMLGDYDIGQFKRKWPTMVNQFGLQENRWVREMYDKRKMWATAYIRGNFFAGFRTTSRCEGLHSQIRKYVHSQSSLTEFVQQFQRCLYEMRFREAEADFASVHGEPEYHGQLRSLQISATKLFTREMFDIFLPVLDRAAILKVTGQRENYPSVIYVVQKYQVDEKEWYVTCNLLSNEYRCSCLRMESYGMPCDHMIAVLVYLNISEVPKCMVMQRWCRGAKSVLCGELGQGSNFWDTESVGRFASLLDVYYNVCRLASKSVDDYNEQYEKGMNDYNHLKEKNGHVSDDEESRRQGGNGGVRGGRIQRGRGRIGSTSSTPRLWSKRTTHCSLCHVAGHNRLTCPLREQLSEMIEQMYGTSIPHGDVDLSFSNEDFNMSWEWIGFAAWTSCDSSGV 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi471g00009 821 MobiDBLite consensus disorder prediction 27 58 - -
Sebi471g00009 821 Coils Coil 688 708 - -
Sebi471g00009 821 ProSiteProfiles Zinc finger SWIM-type profile. 596 630 IPR007527 GO:0008270
Sebi471g00009 821 Pfam SWIM zinc finger 601 629 IPR007527 GO:0008270
Sebi471g00009 821 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 99 695 IPR031052 GO:0006355
Sebi471g00009 821 MobiDBLite consensus disorder prediction 702 747 - -
Sebi471g00009 821 Pfam FAR1 DNA-binding domain 108 197 IPR004330 -
Sebi471g00009 821 MobiDBLite consensus disorder prediction 702 722 - -
Sebi471g00009 821 SMART 26again6 605 632 IPR006564 GO:0008270
Sebi471g00009 821 Pfam MULE transposase domain 317 411 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi471g00009 Sebi-Chr471 43901 47141 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi471g00009 MULE 1.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi471g00009 - - tpra:123913749 718.768