Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi470g00031 ATGACCTCCTTGGTAAAGGTTAAACTTCTGATGAGAGTTCATCACAAGAATCTAACTTCTCTTATTGGTTATTGCAAAGAAGAAAACAATGTAGGGCTCATCTATGAATATATGGCAAATGGAAACCTGGATGAACATCTTTCAGGAAAAAATAGAAGGGAAAAGTTCTTCACTTGGGAAGAGAGACTCCGAATAGCAGTGGATGCAGCCCAAGGACTGGAATATCTGCATAATGGTTGCAAGCCACCTATCATCCACAGAGATGTGAAAACTACAAATATTTTATTAAATGAAAACTTCCAAGCAAAACTCGCTGATTTTGGCCTATCCAAAACCTTTCCCACTGATGGAGGCACACATTTGTCCACTGTTGTTGCTAGAACTCCCGGTTACTTGGATCCTGAAAATATTGTTGACTCAAGATTACATGAAGACTTTGAGACTAGCTCTGTCTGGAAAGCTGTTGAAATAGGAATGGTTTCTGTGTCCACCAATCCTGCCAGAAGGCCAAACATGAGTGACATAGTGACAGAGCTAAAGGATTGTTTGGCTATGGAATTAGCCCGAAAAACGAAGGGTCGTGACATTGAAAATGATAAAATAGAATTGAACGTGACTACCGAACTCGGTCCTGTAGCTAGGTAG 645 0.4047 MTSLVKVKLLMRVHHKNLTSLIGYCKEENNVGLIYEYMANGNLDEHLSGKNRREKFFTWEERLRIAVDAAQGLEYLHNGCKPPIIHRDVKTTNILLNENFQAKLADFGLSKTFPTDGGTHLSTVVARTPGYLDPENIVDSRLHEDFETSSVWKAVEIGMVSVSTNPARRPNMSDIVTELKDCLAMELARKTKGRDIENDKIELNVTTELGPVAR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi470g00031 214 SUPERFAMILY Protein kinase-like (PK-like) 6 179 IPR011009 -
Sebi470g00031 214 Gene3D Transferase(Phosphotransferase) domain 1 137 206 - -
Sebi470g00031 214 Gene3D Transferase(Phosphotransferase) domain 1 39 136 - -
Sebi470g00031 214 Pfam Protein kinase domain 7 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi470g00031 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Sebi470g00031 214 SMART serkin_6 4 183 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi470g00031 214 Gene3D Phosphorylase Kinase; domain 1 3 38 - -
Sebi470g00031 214 PANTHER OS07G0107800 PROTEIN-RELATED 6 183 - -
Sebi470g00031 214 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi470g00031 Sebi-Chr470 539851 541181 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi470g00031 6 214 Receptor kinase-like Gene Family AT1G51820 48.302 8.61e-78 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi470g00031 Pkinase 1.7e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi470g00031 - - qsa:O6P43_027684 277.33