Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi470g00026 ATGTGCATACAGGCATTGAAGGGGAAGAAAGGGGCTAGATTAGGTGACACAATAGTAGCATCAGTGAAGGAAGCCCATCCTAACGGAAAAGTGAAGAAAGGAAAGGTTGTATATGGGGTAGTTGTGCGCGCAGCAATGCAAAAGGGAAGATGTGATGGCAGTGAGGTCAAGTTTGATGACAATGCTGTGGTGCTTGTTGACAAGCAAGGCCAGCCTATTGGGACCAGAGTTTTTGGGCCAGTGCCTCATGAGCTGAGGCAGAAGAAGCATGTCAAGATTCTTACCTTGGCAGGGCATATTGCATAG 306 0.4771 MCIQALKGKKGARLGDTIVASVKEAHPNGKVKKGKVVYGVVVRAAMQKGRCDGSEVKFDDNAVVLVDKQGQPIGTRVFGPVPHELRQKKHVKILTLAGHIA 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi470g00026 101 SMART Ribosomal_L14_2 1 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi470g00026 101 Gene3D Ribosomal protein L14 1 101 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi470g00026 101 Hamap 50S ribosomal protein L14 [rplN]. 1 101 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi470g00026 101 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 1 100 IPR000218 GO:0003735|GO:0005840|GO:0006412
Sebi470g00026 101 NCBIfam 50S ribosomal protein L14 1 100 IPR005745 GO:0003735|GO:0006412|GO:0015934
Sebi470g00026 101 ProSitePatterns Ribosomal protein L14 signature. 39 65 IPR019972 -
Sebi470g00026 101 SUPERFAMILY Ribosomal protein L14 1 100 IPR036853 GO:0003735|GO:0005840|GO:0006412
Sebi470g00026 101 Pfam Ribosomal protein L14p/L23e 1 100 IPR000218 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi470g00026 Sebi-Chr470 482882 483187 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi470g00026 1 84 Cytoplasmic Ribosomal Protein Gene Family AT3G04400 34.066 6.08e-07 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi470g00026 K02874 - gmx:100818301 185.652