Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi470g00025 ATGGCAAATGGAAACCTAGATGAACATCTTTCAGGAAAAAATAGTATGACAAAGTTCTTCAGTTGGGAAGACAGACTTCGAATAGCAGTGGATGCAGCCCAAGGACTGGAATATCTGCATAATGGTTGCAAGCCACCTATCATCCATAGAGATGTGAAAACTACAAATATTTTATTAAATGAAAATTTCCAAGCAAAATTGTCTGATTTTGGCCTATCCAAAACCTTTCCCACCGATGGATGGACACATTTGTCCACTGTTGTTGCTGGAACTCCTGGTTACCTTGATCCTGACTCTGTCTGGAAAGCTGTTGAAATAGGAATGGCTTCTGTGTCTATCAATCCTGCCAGAAGGCCAAACATGAGTGACATAGTGACCGAGCTGAAGGAGTGTTTGGCTACAGAATTAGCTAGAAAAAGGTCTGGTCGTGACACTGAAAACAATGATTCAATTGAGTTGGTATCCTTAAATATTACAACTGAACTCGCTCCCCTAGCCAGGTAG 504 0.4127 MANGNLDEHLSGKNSMTKFFSWEDRLRIAVDAAQGLEYLHNGCKPPIIHRDVKTTNILLNENFQAKLSDFGLSKTFPTDGWTHLSTVVAGTPGYLDPDSVWKAVEIGMASVSINPARRPNMSDIVTELKECLATELARKRSGRDTENNDSIELVSLNITTELAPLAR 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi470g00025 167 PANTHER OS07G0107800 PROTEIN-RELATED 1 135 - -
Sebi470g00025 167 SMART tyrkin_6 1 128 IPR020635 GO:0004713|GO:0006468
Sebi470g00025 167 Gene3D Transferase(Phosphotransferase) domain 1 1 102 - -
Sebi470g00025 167 ProSiteProfiles Protein kinase domain profile. 1 167 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi470g00025 167 Pfam Protein kinase domain 2 102 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi470g00025 167 ProSitePatterns Serine/Threonine protein kinases active-site signature. 47 59 IPR008271 GO:0004672|GO:0006468
Sebi470g00025 167 SUPERFAMILY Protein kinase-like (PK-like) 1 125 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi470g00025 Sebi-Chr470 476843 477882 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi470g00025 1 167 Receptor kinase-like Gene Family AT4G20450 44.749 4.04e-52 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Sebi470g00025 Pkinase 2.1e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi470g00025 - - gmx:100776284 196.438