Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi470g00019 ATGTTGGAGGGAGGAGCGCCGCAACCTCCGGGGACGGACATGACCGGAATATGCTTCAGAGACCAGCTGTGGCTCAACACATACCCTCTCGATCGCAATCTTGTCTTTGATTACTTCGCCTTATCCCCTTTCTACGATTGGACCTCCAACAACGAGCAACTCCGAATGCGCTCTCTCCACCCCCTCGACCTCTCTCAATTATCGAAAATGACAGGCATTGAGTATGTGCTCAGTGAAGTTATGGAGCCCCACCTGTTTGTTATTCGCAAGCAAAAGAGGGATAGCCCTGACAAAGTTACACCCATGCTTGCTTATTACGTCTTGGATGGTTCAATATACCAGGCTCCACAACTATGCAATGTTTTTGCTGCTCGAATTGGAAGGGCACTCTATTATATACAAAAGGCCTTTACTACAGCTGCCTCAAAGTTGGAGAAGATAGGATACGTCATATTGTACCCATGTCGTATTAAGTATATGGGCTTCATAGCTTGGCAGGCTATTAGGGAAATGCTGCTTTGCCATCTAATTTTTCATACCCATTTGATTTCCCTTTCGTCTTGTGTTCTGCCTGCCTCTGGGTCAGTTGATTCTGAAAATGAGACTGCATTGCTGGAGTCGAAGGTTGGTAAGGAGACAATTGATGTGAAGGAAGTTAAGCGAGTGGATCATATTCTTGCATCCTTGCAACGCAAGCTACCACCAGCTCCACATCCACCACCTTTTCCAGAAGGGTATGTTCCACCCTCAACAGCAGAAACTGAGAAAGGCACTGAAACTCAGGAAGCAGCAGAGTCACAAGCTCCTTCTGTTGATCCCATAATTGATCAAGGGCCTGCAAAAAGAATGAAATTTTGA 858 0.4615 MLEGGAPQPPGTDMTGICFRDQLWLNTYPLDRNLVFDYFALSPFYDWTSNNEQLRMRSLHPLDLSQLSKMTGIEYVLSEVMEPHLFVIRKQKRDSPDKVTPMLAYYVLDGSIYQAPQLCNVFAARIGRALYYIQKAFTTAASKLEKIGYVILYPCRIKYMGFIAWQAIREMLLCHLIFHTHLISLSSCVLPASGSVDSENETALLESKVGKETIDVKEVKRVDHILASLQRKLPPAPHPPPFPEGYVPPSTAETEKGTETQEAAESQAPSVDPIIDQGPAKRMKF 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi470g00019 285 MobiDBLite consensus disorder prediction 231 285 - -
Sebi470g00019 285 Pfam MED6 mediator sub complex component 17 142 IPR007018 GO:0003712|GO:0006357|GO:0016592
Sebi470g00019 285 PIRSF MED6_meta/plant 4 154 IPR016820 GO:0003712|GO:0006357|GO:0016592
Sebi470g00019 285 PIRSF MED6_meta/plant 179 285 IPR016820 GO:0003712|GO:0006357|GO:0016592
Sebi470g00019 285 Gene3D Mediator complex, subunit Med6 11 140 IPR038566 -
Sebi470g00019 285 MobiDBLite consensus disorder prediction 233 247 - -
Sebi470g00019 285 FunFam Mediator of RNA polymerase II transcription subunit 6 11 140 - -
Sebi470g00019 285 PANTHER MED-6-RELATED 12 285 IPR007018 GO:0003712|GO:0006357|GO:0016592
Sebi470g00019 285 MobiDBLite consensus disorder prediction 253 267 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED6 Sebi470g00019 Med6 1.3e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi470g00019 K15128 - gmx:100792248 433.335