Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi46g00085 ATGGACACACACTGCAACACCGCATTCTCACCCGCCGGCCACTTTGTGTCGCCGCAGGATGCATCGACGGTGTCGCCAATGCACTACTCCACCACTCCTCAGCTGCACTACGAGTCGCTCTCGCAACTCAACTTGGAGGTGAGTTCCAATGCCAATAATAGCTGTAGCAGCGGGTGCACCAGCTACGTTGGGTCACCGAGTTCGCTGGCGAGTTATGAGACTCAACGAGCCTGCTTGATGCAGAGGAGCGTTAGCAGCCACTCGCTGCTGAAGAATAATGGGGTCCACTACAACCCCTTTTCTCCTCTGTTTGCTGAGTTATTGGACTCAGGGGACGGTCCGGTGCGGAGAGTTTACAGTACCGGTGATCTGCAGAGAATTAATGGAATGCAACATTTTCATCAGTCAGATAGTCCATTGTCAACTGAGAGCAGTATGATACTAGAAGGAATGGCCAGAACCAGTCCTTACAGCCCAGAGGAGAAGAAGGTGAGGATTGAGAGATATAGAAGCAAGAGAAACCAGAGGAACTTCACCAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGACAGCAGGCCACGTATCAGAGGACGATTTGCTAGGAATGATGAAATTGCAATGAACCCTCCTGTTGAGTGGAGCAATAATAGTACTGGAGAGGAAGAAGACGAGGAAGAGGAAAATTGGGTCAATTTCTTTGATTCCTTGGTTCCTGCAAATAATCTTCCTCAGGACCCTCAAGGCAGTACTTCTTCCTTTGGTGTGTTCTCTTAA 780 0.4897 MDTHCNTAFSPAGHFVSPQDASTVSPMHYSTTPQLHYESLSQLNLEVSSNANNSCSSGCTSYVGSPSSLASYETQRACLMQRSVSSHSLLKNNGVHYNPFSPLFAELLDSGDGPVRRVYSTGDLQRINGMQHFHQSDSPLSTESSMILEGMARTSPYSPEEKKVRIERYRSKRNQRNFTKKIKYACRKTLADSRPRIRGRFARNDEIAMNPPVEWSNNSTGEEEDEEEENWVNFFDSLVPANNLPQDPQGSTSSFGVFS 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi46g00085 259 Pfam CCT motif 164 204 IPR010402 GO:0005515
Sebi46g00085 259 MobiDBLite consensus disorder prediction 236 259 - -
Sebi46g00085 259 ProSiteProfiles CCT domain profile. 162 204 IPR010402 GO:0005515
Sebi46g00085 259 MobiDBLite consensus disorder prediction 208 259 - -
Sebi46g00085 259 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 18 223 IPR045281 GO:0009909
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi46g00085 Sebi-Chr46 2265913 2268056 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi46g00085 150 203 C2C2-CO-like Transcription Factor Family AT5G24930 50.000 9.33e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Sebi46g00085 CCT 1.4e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi46g00085 - - aprc:113859774 371.703