Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi46g00083 ATGTGGGATTGCAGAGAACTTGGCTTATTTATCTGTGCTTTATCAATCTTGCCCTTGGTATGCTTTTCTGCCAACTTTGTTCCTATTGATAATTACCTTATAGACTGTGGAGCCACTACCAATACTTCAATAGATAGCAGAAATTTCACAGCTGATAATTTCTTTAAGAAATTCCTTTCCACCCCACAAGATATCCTTGCCAGTACCTCCTTAAAATCAATCACTTCCTCTAGTGATTCACCTCTTTATCAAACGGCTAGGATTTTCACTGCACCTTCAAAATACACATTTCCTATTAACAAAAAGGGGAGACATTGGATCCGTCTTTATTTCTTTCCATTTGCATATCAAAATTACAATTTGAGTGCTGCAAATTTTGCTGTCGCCACCCAAAACAATGTCCTTCTCAGTAACTTCAGTGTGCAGAAAAATCCTGTTATGAAGGAGTACTCAGTGAATTTGACCTCAGACACACTTGTTATCACCTTTGCCCCTTCCACCAATTCCATTGCTTTTGTGAATGCCATTGAAGTTGTTTCTGTCCCTGATGAACTCATTACTGATGATGCTTTCACCCTAAACCCACGAACAAGCTACTCTGGGTTGTTGACACAATCACTGGAGACAGTTTTCAGGGTTAACATGGGTGGTTCAACTGTCTCCTCTGGCAATGACCCTCTTCATCGAACTTGGGTTCCAGATAAAAGCTTCCTTATACAACCTAACCTAGCCAGTAATTTTTCAAGTATAGGTGCTGTTAAATATGTTAATGGTGGGCCAACAGAAAATATTGCTCCACCTTCTGTCTATGTACCTTGTTCGTTTCACTTCTGTGACATAGTCAGCAAAGGTCTTAACGAACTCTATTTCAATGTTTACATAGACTCCTTGTTAGCTGACAAGGATCTTGATCTCAGTCTAGAAAATAATAATGTTTTGGCAACTCCATATTATTTGGATTTGGTCACAGCCCCAGCTGTCAGCAATAAAATTCTTGTAAGTATTGGCCCTTCTTCTCTCAATACTGATTATCCTAATGCTATTTTGAATGGGCTGGAGATCATGAAAATGAACAACTCTATGAGCAGTCTCAGTGCATCAACAGCTGTGCCTTTGACTATGGTCTTGGTTGGAATTTTCTTTGTACTCTGCAGGAAAAGGAGACGGTTGGCACGGGAAGCGCATTCAAAGACATGGATTCCTTTATCAATCAACGATGGAACTTCTCACACAATGGGAAGCAAGTATTCAAATGGCACAACATTGAGTGCTGCTTCAAATTTTGGGTATCGCATCCCTTTTGTGGCAGTTCAGGAAGCTACAAACAATTTTGATGAGAGTTGGGTTATTGGCATAGGGCTTGCAGAGTTCCGAACTGAAATTGAAATGCTGTCTCAGTTCCGCCATCGCCATCTGGTATCATTGATTGGTTATTGTGATGAAAAGAATGAAATGATCTTGATATATGAATATATGGAGAAGGGAACTCTCAAGAGTCATCTGTATGGTTCAGGTCTCCCAAGCTTAAGTTGGAAGGAGAGACTTGAGATATGCATTGGAGCTGCTAGAGGACTCCATTACCTCCATACTGGCTATGCTAAAGCAGTTATCCACCGTGATGTGAAGCCTGTCATAGATCCATCCCTTCCTAGAGAAATGGTGAACTTGGCAGAATGGTCAATGAAATGGCAGAAAAAAGGGCAATTGGAGCAAATCATAGATCCAACACTTGCGGGGAAAATCAGACATGATTCTCTTAGGAAGTTTGGAGAAACTGCTGAAAAATGCTTGGCTGACTTTGGTGTTGACAGGCCTTCTATGGGAGATGTCTTGTGGAATTTGGAGTATGCTCTCCAACTCCAAGAGGCTGTTGTTCAAGGTGACCCTGAAGAAAACAGTACCAATATGATTGGTGAACTCTCTCCACAGGTCAACAATTTCAACCACGAAGTAAGTGTTTCTGCAGCACAATTTGAAGCTTCAAGTCTTGATGATCTGTCTGGTGTTTCTATGAGTAAGGTATTCTCACAGCTGGTGAAATCTGAGGGGAGGTGA 2055 0.4097 MWDCRELGLFICALSILPLVCFSANFVPIDNYLIDCGATTNTSIDSRNFTADNFFKKFLSTPQDILASTSLKSITSSSDSPLYQTARIFTAPSKYTFPINKKGRHWIRLYFFPFAYQNYNLSAANFAVATQNNVLLSNFSVQKNPVMKEYSVNLTSDTLVITFAPSTNSIAFVNAIEVVSVPDELITDDAFTLNPRTSYSGLLTQSLETVFRVNMGGSTVSSGNDPLHRTWVPDKSFLIQPNLASNFSSIGAVKYVNGGPTENIAPPSVYVPCSFHFCDIVSKGLNELYFNVYIDSLLADKDLDLSLENNNVLATPYYLDLVTAPAVSNKILVSIGPSSLNTDYPNAILNGLEIMKMNNSMSSLSASTAVPLTMVLVGIFFVLCRKRRRLAREAHSKTWIPLSINDGTSHTMGSKYSNGTTLSAASNFGYRIPFVAVQEATNNFDESWVIGIGLAEFRTEIEMLSQFRHRHLVSLIGYCDEKNEMILIYEYMEKGTLKSHLYGSGLPSLSWKERLEICIGAARGLHYLHTGYAKAVIHRDVKPVIDPSLPREMVNLAEWSMKWQKKGQLEQIIDPTLAGKIRHDSLRKFGETAEKCLADFGVDRPSMGDVLWNLEYALQLQEAVVQGDPEENSTNMIGELSPQVNNFNHEVSVSAAQFEASSLDDLSGVSMSKVFSQLVKSEGR 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi46g00083 684 Gene3D Transferase(Phosphotransferase) domain 1 544 621 - -
Sebi46g00083 684 ProSiteProfiles Protein kinase domain profile. 384 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi46g00083 684 Gene3D Phosphorylase Kinase; domain 1 429 492 - -
Sebi46g00083 684 Pfam Malectin-like domain 34 236 IPR024788 -
Sebi46g00083 684 PANTHER OS03G0124300 PROTEIN-RELATED 275 389 IPR046957 GO:0004672
Sebi46g00083 684 FunFam Putative receptor-like protein kinase 31 182 - -
Sebi46g00083 684 Gene3D - 31 181 - -
Sebi46g00083 684 Gene3D - 273 359 - -
Sebi46g00083 684 Pfam Protein tyrosine and serine/threonine kinase 455 541 IPR001245 GO:0004672|GO:0006468
Sebi46g00083 684 SUPERFAMILY Protein kinase-like (PK-like) 423 543 IPR011009 -
Sebi46g00083 684 Gene3D Transferase(Phosphotransferase) domain 1 493 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi46g00083 Sebi-Chr46 2242293 2244802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi46g00083 10 684 Receptor kinase-like Gene Family AT3G46290 49.940 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Sebi46g00083 Malectin_like 6.4e-24 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi46g00083 - - gmx:100806488 857.44