Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi46g00073 ATGCAGTACCTCGTCACACGTGATTCCACCTCCAACACGCTCGTGCGAGCTCAGTCCTTAATGCAACTCGCCATGAAAACGCTCCAGAAGGAATTCTACCAGATACTATCCGCAAACAGGGATCACTTAGACCCTGAAACCGTCTCCGCCCGTTCCTCCGTCGACCACAGAAGCAGCGTCTCCGATTACGACGACGAAATCTCCGAGGACGAGTTTCGCGTTGCTGGAAACTCCATCTCCGAGACGGAGAGGGTTTCCATGCTCACCATGGCGGATTTGAAGGCCATCGCCGATTGCATGATTTCCTCCGGCTACGGCAAGGAGTGCGTCAAGGTCCAGAAGATGGATTGGGAGGTGCTGGAGTTGAAGATCAAGAGCTGGTTGAACGCCGTGAAGGTCGCCGTCGGGACTCTGTTCTACGGCGAGAGGATCCTCTGCGATCACGTCTTCGCCGCGGCTTCGGGGAAGAGAATCCCTGAGTCCTGTTTTGCAGAGATTACCAGACAGGGCGCTGAAATGCTGTTTGGATTCCCGGAAATGGTGGCAAAATGCAAGAAAACACTCGAGAAAATGTTCAGGACTTTGGATTTATACGAAGCCATCTCTGACCACTGGCCACAAATCGAGTCCATCTTTTCCTTCGAATCAACCTCCAATGTCCGTTCTCAGGCCGTTACGTCCTTGGTAAAACTCGGTGAGGCCGTTAGAACGATGCTAACGGACTTTGAATCGGCGATTCAGAAGGATTCCTCGAAGAAGCCGGTCCCTGGTGGCGGCGTTCATCCCCTCACGCGCTATGTCATGAACTACATCACCTTCCTCGCCGATTACAGCGGCGTGCTCGCTGATATCGTCGCCGATTGGCCGCAATCTCCGTTGCCGGAGTCTTACTATCGAAGCCCCATGCGCGAGGAAAACCCGTCGTCTTCGGAGATATCGGAGCGGATCGCGTGGCTTATACTCGTCGTGCTCTGCAAACTTGACGGCAAAGCGGAACTCTACAAGGACGTGGCGCTTTCTTACCTTTTCTTAACCAACAACATGCAATACGTCGTCGTAAAGGTTCGCAAATCGAACCTAGGGTTCCTCCTCGGCGAGGATTGGTTGGCGAAGCACGAATTGAAGGTTAGAGAGTACGTGTCCAAGTATGAACACGTGGCGTGGAGCAGAGTGTTGTCGGCGTTGCCGGGAAATCCATCGGCGGAGATGCCGGCGGACAAAGCCAGGGCCTGCTTCGTGAGCTTCAACGCCGCGTTCCATGAAGTGTGCAAGAAACAGTCTTCGTGGATCGTATCCGACCCGAAACTGAGAGACGAAATCAAAGTGTCGATAGCTTCGAAGCTGGAGCACAAGTACAGTGAATTCTTCGAGAAAAATCGGGTCGGATCGGAAGCAGTTATAAGTTTTTTGCCCGATGATATTGGGAATTACTTGTCTGACATTTTGTATGGGATTGGAGATTCGGGTAGCGTCTCATCACATTCTTCGTCGACGACGTCGTCTTCACATCGCTCCAATCGCCGGTGA 1527 0.5272 MQYLVTRDSTSNTLVRAQSLMQLAMKTLQKEFYQILSANRDHLDPETVSARSSVDHRSSVSDYDDEISEDEFRVAGNSISETERVSMLTMADLKAIADCMISSGYGKECVKVQKMDWEVLELKIKSWLNAVKVAVGTLFYGERILCDHVFAAASGKRIPESCFAEITRQGAEMLFGFPEMVAKCKKTLEKMFRTLDLYEAISDHWPQIESIFSFESTSNVRSQAVTSLVKLGEAVRTMLTDFESAIQKDSSKKPVPGGGVHPLTRYVMNYITFLADYSGVLADIVADWPQSPLPESYYRSPMREENPSSSEISERIAWLILVVLCKLDGKAELYKDVALSYLFLTNNMQYVVVKVRKSNLGFLLGEDWLAKHELKVREYVSKYEHVAWSRVLSALPGNPSAEMPADKARACFVSFNAAFHEVCKKQSSWIVSDPKLRDEIKVSIASKLEHKYSEFFEKNRVGSEAVISFLPDDIGNYLSDILYGIGDSGSVSSHSSSTTSSSHRSNRR 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi46g00073 508 Gene3D Exocyst complex component Exo70 1 487 - -
Sebi46g00073 508 MobiDBLite consensus disorder prediction 489 508 - -
Sebi46g00073 508 Pfam Exo70 exocyst complex subunit 125 480 IPR046364 GO:0000145|GO:0005546|GO:0006887
Sebi46g00073 508 SUPERFAMILY Cullin repeat-like 2 480 IPR016159 -
Sebi46g00073 508 PANTHER EXOCYST COMPLEX PROTEIN EXO70 10 478 IPR004140 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi46g00073 Sebi-Chr46 1948647 1950250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi46g00073 1 484 EXO70 exocyst subunit family AT5G59730 50.187 1.08e-171 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi46g00073 K07195 - gmx:100808078 776.163