Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi46g00038 ATGGCGGCCACTCCTTCCTCGCGCGAAGAGTTCGTGTACATGGCGAAACTGGCGGAGCAAGCCGAGCGCTACGAGGAGATGGTGGAGTTCATGGAGAAGGTCTCCACCACCAAGGAGGAGAGCAGGGGAAACGAAGACCACGTCTCCGTCATCCGTGACTACCGATCCAAGATCGAAGGTGAGCTCTCCAACATCTGTGATGGAATCCTCAAGCTCCTCGACTCACGCCTCATCCCCTCCGCTTCCTCCGGCGACTCCAAGGTCTTTTACCTCAAAATGAAGGGCGATTACCACAGGTACCTCGCCGAGTTCAAGACCGGCGCCGAGCGAAAAGACGCCGCCGAGAGCACCCTCTCCGCTTACAAATCCGCTCAGGACATTGCGAATGCTGAGCTGCCTCCAACTCACCCAATCAGGCTGGGTCTTGCACTGAACTTCTCTGTGTTTTACTATGAGATTCTTAACTCTCCTGATAGGGCTTGCAACCTTGCAAAACAGGCTTTCGATGAGGCAATTGCTGAATTGGATACATTGGGAGAGGAATCATACAAGGACAGCACCTTGATTATGCAACTTCTTCGTGATAACCTCACCCTTTGGACCTCTGACATGCAGGATGACGGAGCAGATGAGATTAAAGAAGCTGCACCTAAAAATGATGAACAGCAGTAG 672 0.5253 MAATPSSREEFVYMAKLAEQAERYEEMVEFMEKVSTTKEESRGNEDHVSVIRDYRSKIEGELSNICDGILKLLDSRLIPSASSGDSKVFYLKMKGDYHRYLAEFKTGAERKDAAESTLSAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKNDEQQ 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi46g00038 223 PIRSF 14-3-3 2 40 IPR000308 -
Sebi46g00038 223 PIRSF 14-3-3 35 213 IPR000308 -
Sebi46g00038 223 PRINTS 14-3-3 protein zeta signature 174 203 IPR000308 -
Sebi46g00038 223 PRINTS 14-3-3 protein zeta signature 85 107 IPR000308 -
Sebi46g00038 223 PRINTS 14-3-3 protein zeta signature 120 146 IPR000308 -
Sebi46g00038 223 PRINTS 14-3-3 protein zeta signature 54 78 IPR000308 -
Sebi46g00038 223 PRINTS 14-3-3 protein zeta signature 147 173 IPR000308 -
Sebi46g00038 223 ProSitePatterns 14-3-3 proteins signature 2. 183 202 IPR023409 -
Sebi46g00038 223 Pfam 14-3-3 protein 37 201 IPR023410 -
Sebi46g00038 223 SUPERFAMILY 14-3-3 protein 7 203 IPR036815 -
Sebi46g00038 223 Gene3D - 1 37 IPR036815 -
Sebi46g00038 223 Gene3D - 38 214 IPR036815 -
Sebi46g00038 223 Coils Coil 14 34 - -
Sebi46g00038 223 SMART 1433_4 8 214 IPR023410 -
Sebi46g00038 223 PANTHER 14-3-3 PROTEIN 8 36 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi46g00038 Sebi-Chr46 1235591 1237451 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi46g00038 6 223 14-3-3 family AT1G78300 77.734 1.64e-139 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi46g00038 K06630 - gmx:100529128 400.208