Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi46g00004 ATGAGAGAGCAAAGGGTACAACCTAATCTTGAGGAGACTGCTCAAACAGAGAGGTCCCAGTGGGTGCTGAATTCTCCCAATCCTCCACCTCTATGGAAGAAGCTATTGAGTTCAGTCAAGGAGACCATTTTGCCTCATGGGAACAACTTCTGTTTTTCATCCAAGAAGAAAACTTTTTGTGGACATGCTGTTTCTTTTTTGAAGAGTTTGTTCCCAATCCTTACCTGGATAAGAGATTACACAACTTCCAAGTTTAAAGATGATCTCTTAGCTGGTTTAACTCTTGCTAGCCTATGCTTACCTCAGAGCATAGGATATGCTAATTTAGCAAAAGTTGATCCTGAATATGGCCTGTATACCAGTATTGTTCCTCCTTTTATTTATGCTCTGATGGGGAGCTCAAGAGAAATTGCAGTGGGACCTGCAGGTATAGTGTCAATGCTGTTATCTTCCCTGGCCCAGAAAGTGGAAGATCCTGTTGCTAATCCTCTTGGCTATAGGAATTTTATCTTTATTGTGACCTTCTTTACTGGAATATTTCAAGCTGCATTTGGTATTTTTAGGTTGGGTTTTCTTGTGGATTTTCTTTCACATGCTGCCTTAGTTGGATTCATGGCAGGTGCAGCAATCATTATTGGTCTTCAGCAGCTCAAGGGGTTGCTGGGGATTAGTCACTTTACCACCAAAACAGATGCAGTATCAGTGTTGGTATCTATTTCTGATAAAGATGGGGTTAATATACTAAAGCATGTCAAAGGAGGCCTGAATCCAAGTTCAGTTCACCAGTTGGATTTCCATGGTCAACATGTTGGACAAGCAGCCAAAATTGGATTTATTTGTGCAGTTATTGCACTCACTGGAGCAATTGCTGTTGGTCGATCTTTTGCTTCCATTAAGGGATACCATATTGATGGCAATAAAGAAATGTTATCGTTGGGACTTACAAACATTGCAGGATCTTTAACTTCATGCTATGTAGCAACTGGTTCTTTCTCAAGGACAGCTGTAAATTTCAGTGCAGGGTGTCAAACAACAATATCAAATGTTGTGATGGCCATTATTATGCTTTTGTCCCTAGAATTATTTTCAAGGCTCTTATACTACACCCCTGTGGCTATTCTTGCTTCTATTATCCTCTCTGCACTTCCTGGATTAATTAACATAAATGAGGCTTGCTACATCTGGAAGGTTGACAAATTAGACTTCCTTGCCTGTACTGGTGCTTTCCTTGGTGTCTTGTTTGGATCTGTAGAGATTGGTCTTCTTGTTGCAGTGATAATCTCGTTTGGGAAGATACTAATACAATCAATTCGACCTGGAGTAGAAGTTGTAGGTAGAGTTCCAAGAACAGAAGCTTTTTGCGATGTCACTCAATATCCCATGGCCATAAGCACTCCAGGCATCATAGTGATTCGCATAAGTTCTGGCTCACTCTGCTTTGCAAATGCCAATTTTTGGGTCATGGAGGAAGGAGATGACCTTCAAGAATCTACTAAAGGAAAAGTGAAAGCAGTTATTTTGGACATGACAAACCTGATGAATGTTGATACTTCTGGAATTCTAGCACTTGAGGAACTGCACAAGAGGTTGCATTCACGCGGCGTAGAATTAGCTATGGTCAACCCGAGGTGGCTAGTAATTCACAAGCTTAAGGTTGCACACTTTGTGGACAAAATTGGAAAAGAATGGGTTTTCCTTACTGTTGGAGAAGCCTTAGACGCATGTCTCTCTTCTAAAATTGCTACCGCTTGA 1752 0.4092 MREQRVQPNLEETAQTERSQWVLNSPNPPPLWKKLLSSVKETILPHGNNFCFSSKKKTFCGHAVSFLKSLFPILTWIRDYTTSKFKDDLLAGLTLASLCLPQSIGYANLAKVDPEYGLYTSIVPPFIYALMGSSREIAVGPAGIVSMLLSSLAQKVEDPVANPLGYRNFIFIVTFFTGIFQAAFGIFRLGFLVDFLSHAALVGFMAGAAIIIGLQQLKGLLGISHFTTKTDAVSVLVSISDKDGVNILKHVKGGLNPSSVHQLDFHGQHVGQAAKIGFICAVIALTGAIAVGRSFASIKGYHIDGNKEMLSLGLTNIAGSLTSCYVATGSFSRTAVNFSAGCQTTISNVVMAIIMLLSLELFSRLLYYTPVAILASIILSALPGLININEACYIWKVDKLDFLACTGAFLGVLFGSVEIGLLVAVIISFGKILIQSIRPGVEVVGRVPRTEAFCDVTQYPMAISTPGIIVIRISSGSLCFANANFWVMEEGDDLQESTKGKVKAVILDMTNLMNVDTSGILALEELHKRLHSRGVELAMVNPRWLVIHKLKVAHFVDKIGKEWVFLTVGEALDACLSSKIATA 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi46g00004 583 ProSiteProfiles STAS domain profile. 475 575 IPR002645 -
Sebi46g00004 583 CDD STAS_SulP_like_sulfate_transporter 459 568 - -
Sebi46g00004 583 PANTHER SULFATE TRANSPORTER 242 576 IPR001902 GO:0016020|GO:0055085
Sebi46g00004 583 Pfam Sulfate permease family 85 239 IPR011547 GO:0016020
Sebi46g00004 583 Gene3D STAS domain 438 578 IPR036513 -
Sebi46g00004 583 Pfam STAS domain 459 571 IPR002645 -
Sebi46g00004 583 FunFam Sulfate transporter 31 438 578 - -
Sebi46g00004 583 SUPERFAMILY SpoIIaa-like 465 575 IPR036513 -
Sebi46g00004 583 ProSitePatterns SLC26A transporters signature. 114 135 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi46g00004 Sebi-Chr46 136312 141076 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi46g00004 15 580 Inorganic Solute Cotransporters AT5G10180 50.551 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi46g00004 K17469 - gmx:100776591 824.698