Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi469g00001 ATGTTTGATGTGACAGATAATCCTATGGAGGAGATGATTGATTACTCAGATACTTATACGACGAATGAGGAAACAGCAATGACACATGGTTTTGTTGTGGTTATTGTGAGGTCAGACGCGAGAGGGAATGGTCGGAAAACAACGCTAGTATTGGGTTGTGAAAGGAGTGGAAAGTATAAACCATACAAGAATCAGTTGATCCGTAAAGTAACAGGGACAAAAAAATGTGATTGTCCTTTCAGGCTGAGAGGGAGACCAGTAAGTACAGGTGATGGTTGGAGACTGAATGTAGTTTGTGGTTATCACAACCATGAGGTAGCAGAAAATTTGGAGGGTCATGCATATGCTGGTCGTCTAAATGTCGATGAGTTGTCCTTAGTGAATGACATGACAAAGAACATGGTTAAGCCCAGGAATATCTTACTAACATTGAAGGAGCACAATAAGGATAATGTGACTACCATCAAACAAATTTATAATGCCCGGCAAGCCTGTCGAACATCACTAAGGGGTCCACGGACAGAGTTGCAACACCTGATGAAGTTAATGGAAAGAGATAAGTATGTATATTGGCATAGAAGACATGAGGACTCAGATGTTGTTAGAGACATTGTATGGACACATCCAGATGCATTGAAGCTGCTAAACTTATTTTTTATTGTGTTAATTATTGACACCACTTACAAAACCAACAAATACAGGTTGCCATTGCTTGAGGTTGTTCGTGTTACTTCCATTGAGTTGACATTTTCAGTTGCTTTTGCTTACATGGAACAAGAAAAAGCAGATAACTTCATGTGGGTGTTGGAGAAGTTAAAAAGCATGATTTCATTTCTTGATGTATCACCTCAGGTTATTGTTACTGATAGGGATATTGCTCTGATGAATGCAGTGGAGAAGGTTTTTCCTAATGCTACTCAGAGGAGCATAATGGTAGTTGAACACCGCTTCAATAATCCTCTTTACAATGAACTGAGAGGTTTAGTGTCCCGTAATGCTTTGGCTCTTATTGATGATGAGAAGCAACACATTAACTATGTCGGTATCGACAGTTCTGCTTGTGGTTGCACTTTGAGAAACACACATGGATTACCTTGCGCATGCCAACTAGCCCGATACGTTTGTATGGGATACCAACTTCCTATTACTGAGGTTCATACCCATTGGATGAAACTGACATTTAATGATGGGGGCATTGATGGGCCTGGTTATGGATTATCAATTCAACCTGAGTGTGATGAAGTCTTAAGGAGATTCGAAGAACTTGATCTTTCTGGAAAGGTGGTGTTGAAGTCTAAAATGCGGGAAGTTGCATTTCTAGAGACCACTACCATGTGTCCCCCACCTGACAAAGTTAAGACTAGAGGTGGGGTAAAGGGAAAGTTCAAGTCCAAATATTCTACTAAGCGGGATACCTCATTTTTTGAGCATGTAGATGCCATGCATTCACAACATGAAAGTTGTTCTACTCAGCCACCTGGTTTTCAATCTCAACCTATATGCAAAAAACAGGTGACTATTTTAGATCAATTTCCTTCAGTTCTACATCCATTTATTTTCAGGGTAGATGATGTTGAAGCAGATGGGAATTGTGGTTACCGTGCAATTGCTGCATCATTAGGTTTCGGTGAAGATTCTTGGCATGTGATCCGTGATGAATTGAGTAGAGAACTTGTACACTTTCGTGCTTAA 1692 0.4019 MFDVTDNPMEEMIDYSDTYTTNEETAMTHGFVVVIVRSDARGNGRKTTLVLGCERSGKYKPYKNQLIRKVTGTKKCDCPFRLRGRPVSTGDGWRLNVVCGYHNHEVAENLEGHAYAGRLNVDELSLVNDMTKNMVKPRNILLTLKEHNKDNVTTIKQIYNARQACRTSLRGPRTELQHLMKLMERDKYVYWHRRHEDSDVVRDIVWTHPDALKLLNLFFIVLIIDTTYKTNKYRLPLLEVVRVTSIELTFSVAFAYMEQEKADNFMWVLEKLKSMISFLDVSPQVIVTDRDIALMNAVEKVFPNATQRSIMVVEHRFNNPLYNELRGLVSRNALALIDDEKQHINYVGIDSSACGCTLRNTHGLPCACQLARYVCMGYQLPITEVHTHWMKLTFNDGGIDGPGYGLSIQPECDEVLRRFEELDLSGKVVLKSKMREVAFLETTTMCPPPDKVKTRGGVKGKFKSKYSTKRDTSFFEHVDAMHSQHESCSTQPPGFQSQPICKKQVTILDQFPSVLHPFIFRVDDVEADGNCGYRAIAASLGFGEDSWHVIRDELSRELVHFRA 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi469g00001 563 CDD OTU 521 563 - -
Sebi469g00001 563 Pfam MULE transposase domain 221 308 IPR018289 -
Sebi469g00001 563 ProSiteProfiles OTU domain profile. 520 563 IPR003323 -
Sebi469g00001 563 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 10 315 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi469g00001 Sebi-Chr469 25650 28040 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi469g00001 MULE 1.9e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi469g00001 - - vum:124840412 519.235