Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi468g00050 ATGCATTCTCTTAGGTGGGCTGCTATAGCATCCCAACTACCAGGAAGAACAGACAATGAGATTAAGAACTATTGGAACACCCATCTAAAGAAGCGCCTCCTTCGGTCTGGTCATTCCCTAGGGACAAAACAACCATGTGTCATTCCTGATAAAAGGATTGTCCAATCTGAATCTCCTTCTACACGCCACATGATACAATGGGAAAGTGCCAGAGTTGAGGCAGAGGCAAGGTTGTCAATGGAATCCTCATTGCATAATTCATCCTCATTGCATAATCCACATGATTACTTTCTTCAACTTTGGCATTCTGAGGTTGGACAGTCATTTCGGATGAACAAGGGAAAGGAAGGAGTAGTGTGTCAAAGCCTTGTCTCACAAGCACCATCATCATCATCTTCAGATGTGTCATTGCAAGTGAAAAACACTGGAACTAGTAACCATAAGCCAAAGCTTGAAGATGTCAACAAAATTCAAGAACAAGCAAGTAGCTACAAACCAAAGCTTGAAGATGAGTCAGGCAATTATGAATTTCTTGATACTTCTGATTCTGCACTAAAGCACCTACTAGATAGTGATATAGGATTCATGGGACAGACTGACAATTTCCTGAATCTCCTTGATGGGGGGAAAAGGGTTGACATAGGAATAGTTGCTAGAGTTCAAAGTTTACCTACCACTTTATGGTGGGTGGCAGTGGTGAAGGGTGGCATTAATGGTTTCAGGGTTAATGATATTGTTCATGTCCTTCAACAACTGGTAACTGTTGCTTAG 771 0.4176 MHSLRWAAIASQLPGRTDNEIKNYWNTHLKKRLLRSGHSLGTKQPCVIPDKRIVQSESPSTRHMIQWESARVEAEARLSMESSLHNSSSLHNPHDYFLQLWHSEVGQSFRMNKGKEGVVCQSLVSQAPSSSSSDVSLQVKNTGTSNHKPKLEDVNKIQEQASSYKPKLEDESGNYEFLDTSDSALKHLLDSDIGFMGQTDNFLNLLDGGKRVDIGIVARVQSLPTTLWWVAVVKGGINGFRVNDIVHVLQQLVTVA 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi468g00050 256 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 33 IPR017930 -
Sebi468g00050 256 MobiDBLite consensus disorder prediction 128 149 - -
Sebi468g00050 256 ProSiteProfiles Myb-like domain profile. 1 29 IPR001005 -
Sebi468g00050 256 CDD SANT 5 29 IPR001005 -
Sebi468g00050 256 Gene3D - 1 57 - -
Sebi468g00050 256 SUPERFAMILY Homeodomain-like 4 38 IPR009057 -
Sebi468g00050 256 MobiDBLite consensus disorder prediction 128 145 - -
Sebi468g00050 256 Pfam Myb-like DNA-binding domain 5 29 IPR001005 -
Sebi468g00050 256 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 5 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi468g00050 Sebi-Chr468 625442 626381 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi468g00050 5 220 MYB Transcription Factor Family AT3G61250 41.228 3.26e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Sebi468g00050 Myb_DNA-binding 1.3e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi468g00050 K09422 - gmx:100782075 261.922