Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi468g00009 ATGCCTTCATGGTGGGGAAAATCATCATCAAAAGAAACCAAGAAGAAAGCTGGTAAGGAAAGTTTTATATACACATTGCACCGAAAACTTAAAATTCCATCTGAAGGTAGACTAAGCATTATATCTGGAGGATCTCGTAGACATTGCAATGACACAATTTCAGAGAAGGGGGATCGTTCTCCAGCTGAATCAAGATCTCCTTCACCTTCTAAAGTGGCTAGGTGTCAAAGTTTTGCTGAAAGGCCTCATGCTCAGCCACTACCACTTCCTGGTCTGCACCCTGCAAGTGTAGGCCGAGTAGATTCTGAAATTAGCATATCATCAAAATCAAGACTGGAAAAGGGCTCCAAGCCATCATTGTTTCTTCCACTTCCAACACCTGGATGCATACGTTGTAGGCCAAACCCTGCAGATTTGGATGGAGATATTGTCACTGCTTCAGTCTTTAGTGATTGCTCTGCTGATAGTGATGAGCCAGCAGACTCACGCAATCGCAGTCCTCTGGCAACTGACTCTGAGACTGGGACTAGAACTGCTGCTGACAGTCCTTCCAGCTTGATGCTCAAGGATCAATCATCTGCTGCTTCCCAATTGAATTCAAGAGAAGTAAAAAAACCGGCAAACATTCTAAGTAATCATGTGTCTTCTACTTCACCCAAACGGAGACCTTTACGAAACCATGTTCCAAACCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCTGACAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGGGCATTTGGCACAGATCAGGTGTTGAACTCTGCTTTTTGGGCTGGAAAGCCATATCCCGAGGTCAATTTAGTTGGATCTGGGCACTGCTCTAGTCCGGGTTCTGGTCATAATTCTGGGCACAATTCAATGGGAGGGGACATGTCAGGACCATTATTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCGGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCTAGAGCTGGGGGAACGCCCACTGAATCGCAGACAGGATGGATTGATGATGGAAAACAACAGAGTCACCGTTTGCCCCTTCCTCCTTTATCAATTACCAATTCCTCGCCATTCTCTCATTCTAATTCTGCAGCAACATCTCCATCTATGCCAAGAAGTCCAGCTAGAGCGGATAACCCAATGAGCTCTGGGTCACGTTGGAAAAAAGGAAAGCTGCTTGGCAGAGGCACATTTGGACACGTCTATCTTGGCTTCAATAGTGAAAGTGGTGAAATGTGTGCAATGAAGGAGGTTACTCTGTTTTCAGATGATGCCAAGTCTATGGAAAGTGCTAAGCAATTAATGCAGGTAGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTCAAGAGTATGGACAATTTGGTGAACTAGCTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTACATGCTAAACATACTCTCCACAGAGACATCAAAGGAGCAAATATACTGGTAGATCCAAATGGTCGGGTCAAGTTGGCAGACTTTGGCATGGCGAAACATATAACAGGGCAGTCATGTCCATTGTCATTCAAAGGAAGCCCTTATTGGATGGCTCCCGAGGTTATAAAGAACTCTAACGGATGCAGCCTTGCTGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACAACCAAGCCTCCTTGGCATCAGTATGAAGGGGTTGCTGCGATGTTCAAGATTGGTAATAGTAAGGAACTCCCAGCAATCCCAGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGAAAATGTCTACAACGTAATCCACGTGATCGCCCTTCAGCAAGTGAATTATTGGACCACCCTTTTGTAAAATGTGCTGCACCTTTGGAAAGACCAATTCTTGTTCCTGAAGCTTCAGACCCTGTTTCTGGGATCACACAAGGAACAAAAGCTCTGATGGAAAAGGCAGGGACAGTAGCTTCTGACATAGATTGGGTTGAGGAAATATGGGATAACGGTTGGAACAGAATAAAGGTTCTAAGGGGCATTGGTCAAGGAAGAAATCCGTCTGCCTTGGATTCAGATAAACTCTCTGTTCATTCTTCTAGGCACAGGAATGGGAGAATGTCTCCTTCTCCTATATCTAGCCCTCGGACTGCTTCTGGTGCATCCACGCCTCTCACTGGTGGCAGTGGTGCCATTCCATTTAGCAATCACTTAAAACAGTCAGTTTACTTTCAAGAGGGTCTTGGAAGCATGCCAAAGTCCTCAAATGGTGTCTACATTAATGGCTCTGCTCATCACGACTCAAATGTTGACATTTTTCGAGGAATGCAAATGGGGTCTCACATGACATCAGAACTTCTTTCCAGTGAAAATGATGTTCTGGGTAAGCAGTTTGCAAGGTCTCCACATTCAGAGCCATATGATTTTCAGTCAGTCTTAGCTGATCGTGTTGGCCGGCAGCTTTTGGGCGACCCTGTTAAGATTAACCCTTCCCTTGATCTAAGTCCCAACTCATCTTTGCTCAACCGAGCAAATGGTTTATGA 2619 0.4471 MPSWWGKSSSKETKKKAGKESFIYTLHRKLKIPSEGRLSIISGGSRRHCNDTISEKGDRSPAESRSPSPSKVARCQSFAERPHAQPLPLPGLHPASVGRVDSEISISSKSRLEKGSKPSLFLPLPTPGCIRCRPNPADLDGDIVTASVFSDCSADSDEPADSRNRSPLATDSETGTRTAADSPSSLMLKDQSSAASQLNSREVKKPANILSNHVSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFGTDQVLNSAFWAGKPYPEVNLVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPRAGGTPTESQTGWIDDGKQQSHRLPLPPLSITNSSPFSHSNSAATSPSMPRSPARADNPMSSGSRWKKGKLLGRGTFGHVYLGFNSESGEMCAMKEVTLFSDDAKSMESAKQLMQVDDKLYIYLEYVSGGSIHKLLQEYGQFGELAIRSYTQQILSGLAYLHAKHTLHRDIKGANILVDPNGRVKLADFGMAKHITGQSCPLSFKGSPYWMAPEVIKNSNGCSLAVDIWSLGCTVLEMATTKPPWHQYEGVAAMFKIGNSKELPAIPDHLSNEGKDFVRKCLQRNPRDRPSASELLDHPFVKCAAPLERPILVPEASDPVSGITQGTKALMEKAGTVASDIDWVEEIWDNGWNRIKVLRGIGQGRNPSALDSDKLSVHSSRHRNGRMSPSPISSPRTASGASTPLTGGSGAIPFSNHLKQSVYFQEGLGSMPKSSNGVYINGSAHHDSNVDIFRGMQMGSHMTSELLSSENDVLGKQFARSPHSEPYDFQSVLADRVGRQLLGDPVKINPSLDLSPNSSLLNRANGL 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi468g00009 872 SUPERFAMILY Protein kinase-like (PK-like) 409 647 IPR011009 -
Sebi468g00009 872 MobiDBLite consensus disorder prediction 285 413 - -
Sebi468g00009 872 MobiDBLite consensus disorder prediction 285 300 - -
Sebi468g00009 872 SMART serkin_6 411 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi468g00009 872 MobiDBLite consensus disorder prediction 348 362 - -
Sebi468g00009 872 MobiDBLite consensus disorder prediction 40 97 - -
Sebi468g00009 872 Pfam Protein kinase domain 412 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi468g00009 872 MobiDBLite consensus disorder prediction 152 232 - -
Sebi468g00009 872 MobiDBLite consensus disorder prediction 370 404 - -
Sebi468g00009 872 MobiDBLite consensus disorder prediction 711 756 - -
Sebi468g00009 872 MobiDBLite consensus disorder prediction 108 127 - -
Sebi468g00009 872 ProSiteProfiles Protein kinase domain profile. 411 646 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi468g00009 872 MobiDBLite consensus disorder prediction 727 756 - -
Sebi468g00009 872 Gene3D Transferase(Phosphotransferase) domain 1 408 663 - -
Sebi468g00009 872 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 60 460 - -
Sebi468g00009 872 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Sebi468g00009 872 MobiDBLite consensus disorder prediction 165 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi468g00009 Sebi-Chr468 121609 127171 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi468g00009 1 769 MAP Kinase Kinase Kinase AT1G63700 59.649 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Sebi468g00009 Pkinase 3.7e-58 CL0016