LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi467g00020	ATGGAATGTGAGTACCTGAAGAGGTGGTTTGGGTCACTGACAGAACAGAACCGGAGGCTGCAAAGGGAAGTGGAGGAACTGAGGGCTATGAAAGTGGGTCCACCCACTGTCTTATCCCCTCACACTTGCGAGCCACTACCAGCATCCACCCTAACCATGTGTCCCCGCTGTGAGCGTGTCACCACCACCGTCGCCGCAGCAAACGTCGACAAAGCAGCCACCGCCGCCGCCACTTTGTCCCCTAAAGTGCCCACGCCTGCCCTTCAATCGCGTCAACCTTCTGCGGCTTGTTGA	294	0.5782	MECEYLKRWFGSLTEQNRRLQREVEELRAMKVGPPTVLSPHTCEPLPASTLTMCPRCERVTTTVAAANVDKAATAAATLSPKVPTPALQSRQPSAAC	97

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi467g00020	97	PANTHER	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14	1	80	-	-
	Sebi467g00020	97	MobiDBLite	consensus disorder prediction	76	97	-	-
	Sebi467g00020	97	SMART	halz	1	40	IPR003106	GO:0006355\|GO:0043565
	Sebi467g00020	97	Pfam	Homeobox associated leucine zipper	2	31	IPR003106	GO:0006355\|GO:0043565
	Sebi467g00020	97	Coils	Coil	10	30	-	-
	Sebi467g00020	97	MobiDBLite	consensus disorder prediction	83	97	-	-

Showing 1 to 6 of 6 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Sebi467g00020	Sebi-Chr467	512282	512575	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Sebi467g00020	1	79	Homeobox Transcription Factor Family	AT1G70920	58.228	4.56e-22	83.2

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi467g00020	K09338		-	qsa:O6P43_032613	156.377

Showing 1 to 1 of 1 entries