Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi466g00011 ATGGCAGAATTGGATGGCGTGGTCTCTGTTTTCCCAAGTAAAAACCATAAGCTCCATACAACAAGTTCATGGGACTTCATAGGCTTCCCTCAAGATATTAGAAGAACCAACATAGAGAGCGACATAATCATAGGAGTAATTGATACCGGAATATGGCCTGAGTCAGTTAGCTTTAATGACGAAGGATTTGGTCCACCACCACAGAAATGGAAGGGCAGTTGCCACAACTTTACCTGCAATAATAAACTAATTGGAGCAAAATATTTGCGCATAGATGGATTGTATGGAAAAGATGACATCATATCTCCAAGGGATTCGAATGGTCATGGGACTCATTGTGCCTCCACTGCTGCTGGAAACTCAGTTAAATCTGCAAGTTTATTTGGACTTGCTTCAGGGACAGCAAGAGGAGGAGTTCCATCAGCACGTATTGCTGTATACAAATCGTGTTGGTCAGGAGGTTGTGAAGAAGCTGACACCCTTGCAGCATTTGATGAAGCCATTGCAGATGGTGTTGACATCATTTCCCTTTCAGTGGGACCTCGAACAGTGATACACAAAAACTATTTTGAGGACATATATGCCATAGGAGCTTTCCATGCGATGAAGAAAGGCATATTAACATCGACATCTGCTGGTAATTTAGGTCCACAACTTTACTCAAGCCCAAAAGTTGCACCATGGTTACTTTCTGTAGCAGCTAGCACTATAGACAGAAAGTTTTTACCAAGGTTCGGTTGGGTGATGGTACCATCTTTCAGGTCTTGCCTTGAAGGTTCTTTAGAACAAGATTTGGTAAAGGGAAAGATTGTTCTTTGCGATGGGGGTTCCTCATCAGTGGGACTCGTTTCTGGGGCAGCTGGTATTCTATTTCGTAGTGTCGCTCCACAAGATGTGGCACGTACATTTGCACTGCCAGCGATTCATCTTAGCGAAAACGATGGAAAACTCATACATTCTTACATAAATTCAACAAGTAATCCAACAGCTATAATATTTAAGAGTACTGAAGACAAAGATTTGTTTGCCCCATACATAGCTTCATTCTCATCTAGAGGTCCAAATGCTATCACTCCAGACATTCTCAAGCCTGATCTAGCTGCTCCAGGAGTTGACATTCTAGCTGCATGGTCTCCAATTTCTCCCATTTCTGGGGTTAAAGGCGATGATAGAGTAGCAAACTACAACATTATATCTGGAACTTCAATGGCTTGGCCTCATGCTACTGCAGCTGCTGCCTACGTCAAATCATTTCATCCCAATTGGTCACCGGCGACAATCAAATCTGCACTAATGACCACTGCCACCCCTATGAGTGCCACACTTAATCCGGAAGCTGAATTTGCTTATGGTGCGGGGCAAATTAACCCCATTAAGGCAGTGAATCCTGGATTAGTATATGATGCCGATGAAATAGATTATGTTAAGTTTCTATGTGGACAAGGTTATGATAATAAAAAGCTACGAACCATCACAGATGATAGTAGCAGTTGTACGTCAACTAATAATGGAACCGTTTGGGACCTTAATCTCCCATCTTTTGCTCTTTCCACAAACGTGTCAAGATCTTTTAGTCGCATTTTCCATAGAACTGTTACAAATGTTGGATCTGCAACATCGAGGTACAAAGCTAGAATAAACGCACCTCCATCTTTGTTAAACATTAAAGTGGAGCCAGATGTTTTGTCTTTCTCATCTGTGGGTGAAAAGAAGTCATTTACTCTAAGGATTGAAGGGAGCATTAATGTGGATATAGTTTCTTCTTCTTTGGTTTGGGATGATGGCGTTTTTCAAGTAAGGAGCCCTATTGTTGTTTATGCTAAATAA 1827 0.4165 MAELDGVVSVFPSKNHKLHTTSSWDFIGFPQDIRRTNIESDIIIGVIDTGIWPESVSFNDEGFGPPPQKWKGSCHNFTCNNKLIGAKYLRIDGLYGKDDIISPRDSNGHGTHCASTAAGNSVKSASLFGLASGTARGGVPSARIAVYKSCWSGGCEEADTLAAFDEAIADGVDIISLSVGPRTVIHKNYFEDIYAIGAFHAMKKGILTSTSAGNLGPQLYSSPKVAPWLLSVAASTIDRKFLPRFGWVMVPSFRSCLEGSLEQDLVKGKIVLCDGGSSSVGLVSGAAGILFRSVAPQDVARTFALPAIHLSENDGKLIHSYINSTSNPTAIIFKSTEDKDLFAPYIASFSSRGPNAITPDILKPDLAAPGVDILAAWSPISPISGVKGDDRVANYNIISGTSMAWPHATAAAAYVKSFHPNWSPATIKSALMTTATPMSATLNPEAEFAYGAGQINPIKAVNPGLVYDADEIDYVKFLCGQGYDNKKLRTITDDSSSCTSTNNGTVWDLNLPSFALSTNVSRSFSRIFHRTVTNVGSATSRYKARINAPPSLLNIKVEPDVLSFSSVGEKKSFTLRIEGSINVDIVSSSLVWDDGVFQVRSPIVVYAK 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi466g00011 608 Pfam Subtilase family 40 453 IPR000209 GO:0006508|GO:0008236
Sebi466g00011 608 CDD Peptidases_S8_3 16 436 IPR034197 -
Sebi466g00011 608 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 3 605 IPR045051 -
Sebi466g00011 608 Gene3D Peptidase S8/S53 domain 340 474 IPR036852 GO:0004252|GO:0006508
Sebi466g00011 608 Gene3D Peptidase S8/S53 domain 41 237 IPR036852 GO:0004252|GO:0006508
Sebi466g00011 608 ProSitePatterns Serine proteases, subtilase family, histidine active site. 109 119 IPR022398 -
Sebi466g00011 608 SUPERFAMILY Subtilisin-like 26 462 IPR036852 GO:0004252|GO:0006508
Sebi466g00011 608 PRINTS Subtilisin serine protease family (S8) signature 399 415 IPR015500 -
Sebi466g00011 608 PRINTS Subtilisin serine protease family (S8) signature 39 58 IPR015500 -
Sebi466g00011 608 PRINTS Subtilisin serine protease family (S8) signature 105 118 IPR015500 -
Sebi466g00011 608 CDD PA_subtilisin_like 254 332 - -
Sebi466g00011 608 ProSitePatterns Serine proteases, subtilase family, serine active site. 400 410 IPR023828 -
Sebi466g00011 608 Gene3D - 254 339 - -
Sebi466g00011 608 Gene3D - 478 607 - -
Sebi466g00011 608 ProSiteProfiles Serine proteases, subtilase domain profile. 23 461 - -
Sebi466g00011 608 FunFam Subtilisin-like protease SBT1.5 41 271 - -
Sebi466g00011 608 Pfam Fibronectin type-III domain 508 605 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi466g00011 Sebi-Chr466 233444 238533 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi466g00011 1 607 Subtilisin-like Serine Gene Family AT3G46850 48.182 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi466g00011 - - gmx:100801111 946.806