Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi466g00002 ATGAGAAAAGGTGCATGGACATATGAGGAAGACAAGCTACTCAAGGCTTGCATTAACAAGTATGGGGTAGGAAAATGGCATTTGGTTCCTGAAAAAGCAGGGTTGAATAGATGCCGAAAAAGTTGTAGATTGAGGTGGTTGAATTATTTAAATCCCAACATCAACAGAGGAAGCTTTACTGAGGATGAAGTTGATATGATTCTAAGGTTACATAAACTTCTAGGAAACAGATGGTCCTTGATAGCTGCAAGGCTTCCGGGTAGAACAGCTAATGATGTGAAGAACTACTGGCACACACACTTGAGCAAGAAGAAGGTGACCTCTAATTATATCAAGGAAGACAACAAAGAAAAGGAGAAACCAGTAAAGGAAACCGTGAAACCTCATGAAGTTATAAAACCTCGACCTCGAATTTTTTCAAATAATTCACCATGGTTGAAGGGGAAACACGTTCTTGAAAATTATGGTGATGTAATTAGAGAGTGTGCTATACCTCTAGTGGCTTCAAATGATGATAATGTTCCGATTGCAAAGTGTGACACACAAACAACTGTGCTCCCACTTGGGGGTTATGGAGATTGTGATGCACAACCATATTTTGCTAATGCCCCACATTCTGCAATGTGGTGGGAGAGCTTGTTGAACTTGGATGACAATGTAGGCGATGGTGAGAAAGTTGGCACATATTCTTTGTCAAATGAGAATTCCATCTTGGAGCTTCCAAATGTGGAGAACTTCACCCAAGGCTCCACTG 754 0.4085 MRKGAWTYEEDKLLKACINKYGVGKWHLVPEKAGLNRCRKSCRLRWLNYLNPNINRGSFTEDEVDMILRLHKLLGNRWSLIAARLPGRTANDVKNYWHTHLSKKKVTSNYIKEDNKEKEKPVKETVKPHEVIKPRPRIFSNNSPWLKGKHVLENYGDVIRECAIPLVASNDDNVPIAKCDTQTTVLPLGGYGDCDAQPYFANAPHSAMWWESLLNLDDNVGDGEKVGTYSLSNENSILELPNVENFTQGST 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi466g00002 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 51 105 IPR017930 -
Sebi466g00002 251 SUPERFAMILY Homeodomain-like 2 97 IPR009057 -
Sebi466g00002 251 Gene3D - 58 130 - -
Sebi466g00002 251 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 50 IPR017930 -
Sebi466g00002 251 SMART sant 2 52 IPR001005 -
Sebi466g00002 251 SMART sant 55 103 IPR001005 -
Sebi466g00002 251 ProSiteProfiles Myb-like domain profile. 51 101 IPR001005 -
Sebi466g00002 251 Pfam Myb-like DNA-binding domain 56 101 IPR001005 -
Sebi466g00002 251 Pfam Myb-like DNA-binding domain 3 50 IPR001005 -
Sebi466g00002 251 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Sebi466g00002 251 CDD SANT 58 101 IPR001005 -
Sebi466g00002 251 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 125 - -
Sebi466g00002 251 Gene3D - 3 55 - -
Sebi466g00002 251 CDD SANT 5 50 IPR001005 -
Sebi466g00002 251 FunFam Myb transcription factor 3 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi466g00002 Sebi-Chr466 41418 43376 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi466g00002 1 141 MYB Transcription Factor Family AT1G66370 64.789 4.29e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi466g00002 Myb_DNA-binding 4.1e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi466g00002 - K09422 tpra:123921946 278.1