Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi464g00075 ATGGAATCTATGTTTCAAGAAGAAGGGTCCTCTTCTGTAACTTCTTCACCTCTACAGTTCTTCTCCATGATGTCACTTTCACCTAGCATAGGATCTCCTTACCCATGGCTTAGAGAACTCAAATCAGAGGAAAGAGGTTTGTACTTGATCCATTTGTTGCTCACTTGTGCAAACCATGTTGCTGTTGGTAGTCTTGAAAATGCAAACATCACACTTGAGCAAATTTCCCAGCTTGCTTCCCCTGATGGTGATACCATGCAGAGAATTGCTGCATACTTCACTGAAGCACTTGCTGATAGGATACTCAAAACTTGGCCTGGCCTTCACAGGGCCCTCAATTCCACCAGAATAGTTATGGTTTCTGAAGAAATTCTTGTCCAGAAGCTCTTCTTTGAGCTTTTTCCTTTCTTGAAGGTAGCATATATTCTGACAAATCAGGCTATTGTTGAAGCAATGGAAGGGGAGAAAATGGTACATATAATTGATCTCAATGCTGCTGAACCTGCTCAGTGGATTGCTCTCCTCCAAGTTTTGAGTGCACGTCCTGAAGGCACTCCTCATTTGAGAATTACTGGGGTACATCACCAGAAAGAGATTCTGGATCAGATGGCTCATAAGCTTACTGAAGAAGCAGAAAGGTTGGATATCCCATTCCAATTCAATCCTGTAGTTAGCAAGTTAGAAAATCTTGATTTTGACAAACTTCGTGTGAAAACTGGTGAGGCACTTGCAATAAGTTCTATTCTGCAATTACATTCCCTTTTGGCCTTGGATGATGAAGCCTTGCGGAGAAAATCTCCTCTTTTGTCAAAACATTCAAATGGAATTCACCTGCAAAAAGCTCTGCTCATGAACCAAAGTACATTGGGTGATTTGCTTGAAAAAGACATGGTTAATGGATATAGTCCAAGTCCTGACTCAGCCTCATCTTCACCAGCATCTTCAACTGCTTCAATGAATTCAGAGAGCTTTCTTAATGCCTTATGGGGATTATCACCAAAGGTCATGGTTGTAACAGAACAAGACTCCAATCATAATGGTTCCACTCTGATGGAGAGGCTGCTGGAAGCTCTATATTCTTATGCAGCATTGTTTGATTGTTTGGAATCCACTGTCTCAAGAACATCATTGGAGAGATTAAAGGTGGAGAAGATGCTTTTTGGTGAGGAAATCAAGAACATTATTGCATGTGAGGGAGCTGAAAGAAAGGAAAGACATGAAAAGCTGGATAAGTGGATTCAAAGACTTGATTTATCTGGGTTTGGAAATGTGCCTTTAAGCTATTATGGTATGTTGCAGGCAAGGAGGTTCCTGCAGAGCTATGGTTGTGAGGGATATAGGATGAGGGAAGAAAATGGCTGTGTAGTAATTTGCTGGCAGGATCGGTCCTTGTTTTCAACAACAGCTTGGAGACCTAAGAAGTAA 1425 0.414 MESMFQEEGSSSVTSSPLQFFSMMSLSPSIGSPYPWLRELKSEERGLYLIHLLLTCANHVAVGSLENANITLEQISQLASPDGDTMQRIAAYFTEALADRILKTWPGLHRALNSTRIVMVSEEILVQKLFFELFPFLKVAYILTNQAIVEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGTPHLRITGVHHQKEILDQMAHKLTEEAERLDIPFQFNPVVSKLENLDFDKLRVKTGEALAISSILQLHSLLALDDEALRRKSPLLSKHSNGIHLQKALLMNQSTLGDLLEKDMVNGYSPSPDSASSSPASSTASMNSESFLNALWGLSPKVMVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERLKVEKMLFGEEIKNIIACEGAERKERHEKLDKWIQRLDLSGFGNVPLSYYGMLQARRFLQSYGCEGYRMREENGCVVICWQDRSLFSTTAWRPKK 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi464g00075 474 ProSiteProfiles GRAS family profile. 40 471 IPR005202 -
Sebi464g00075 474 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 45 467 IPR005202 -
Sebi464g00075 474 Pfam GRAS domain family 49 471 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi464g00075 Sebi-Chr464 743469 744893 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi464g00075 1 474 GRAS Transcription Factor Family AT1G50420 69.215 0.0 679
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi464g00075 GRAS 5.1e-139 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi464g00075 - - cave:132164091 795.423