Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi464g00065 ATGGGGTGCATCTGCTCAAAAGAGTCCTCAAACAAAGACAAAGTTGATGAATATGAGAAAGAAAAAGAGTTTAGCAAGTCTTCAGTACAATTGGTTGCTCCTGCACAGTTTGATGGTGGTGGCATGGATGGTTCAGGGCCTCGTTTGGCTAATCCATCCTCACAAGCAATTTGGGGGTGTGCCCAAAAGCTACCAGATGATAAAAACTTAAATAGCCAGCATCAGAAATATAAGACTATAGATGAAAAAAAGCCACTAATGAGTAGAATACTTAGTGTGCAACATTGTGTAGGACAACACATTGATGCTGGTTGGCCAATATGGTTATCTTCAGTGGCAGGAGAAGCCATCAAAGGGTGGGTGCCTCGACGGGCAGACTCTTTTGAAAAATTAGACCAAATTGGACAAGGGGCTTATAGCAGTGTGCATAAAGCTCTTGACCTTGAAACTGGTAAATATGTGGCTTTGAAGAAAGTTCGTTTTTCAAGTACAGATCCAGAAAGTGTGCGTTTCATGGCAAGGGAAATCTATATATTGCGTCAACTTGACCATCCTAATGTCATCAAACTTGAAGGTCTTGTCACATCAAGCACCTCCACCAGTTTGTACCTTGTTTTAGAGTACATGGAGCATGACCTTGCTGGTCTAGCAGCTACGCCTGGCGTAAAATTCACTGAGGCACAGATTAAATGTTACATGAAGCAACTGCTTTGTGGGCTTGAACACTGTCATAATAGGGGTGTGCTGCACCGTGATATCAAGGGTTCAAATCTTCTGCTTGACAACAATGGAAATCTTAAGATTGGGGATTTTGGTCTTGCAACTGTTTATGAACCTGATAAAAAGCAGCCTTTGACTAGCCGTGTTGTGACTCTGTGGTACAGAGCACCTGAACTTTTGCTAGGTGCTACAGACTATGGAGCTGCAATTGACTTGTGGAGTGTTGGTTGCATTCTAGCAGAATTGCTGGTGGGGAAGCCAATCATGCCTGGAAGAACAGAGGTGGAACAAATGCACAAGATATTTAAACTTTGTGGATCCCCATCAGAAGAGTATTGGAAGAGAACAAAATTTCCGCATGCAACAAGTTTTAAACCACAACACCGTTACAAACGCCAAGTGGCTGACACATTTAAAAGCTTTTCTTCTGTGGCATTGGCTCTTGTTGATAAGCTCCTTGCCATAGAACCAGACCATCGAGGTTCTTCAACTTCTGCACTCAACAGTGAGTTCTTCACTACAAACCCCCTTCCTTGTGATCCATCAAGTTTACCAAAGTTTCCACCAAGCAAGGAATTTGATGCCAAGCGCCGAGATAAGGAAGCAATAAGAAAAAACACAGAAGCTGTTAAAGGACGTGGACCGGTATCTGTTTTAAGGGGAGCAGGAGATACCAAAGTAATGGAAACACCAGAGTATAATGCAAGAGGAGATATATCTATGCGGGGGAAGACAAATAGTAGAATGTCCCACTCCCATCTCAAATATGAAACCCAGGAGGATGGTGGGTCTCACCACAAGTGTGAGCCTACTAGAGTATCCTTACAGAATGGCTATACACATTCTTCTTCAATGATGCACGGTGGTACAGCAGGACCATACTCATTGAATAAGAGGCCAGAAACATCTAAGAAGAATCCAGAGTTACGGAAACAGAGTTCTCTTTTGAATCAGGAAGCAGCAGATTTCTCTAACTCTTCTACTAAAAAGGAACCAAGCCGAGAACTTGGAATGGGGTATGTGCCTAAGAAGAATAGGATCCATTGCTCTGGACCATTGGTGCCTCCGGGTGGGAACATTGATGACATGCTCAGAGAGCATGAACGGTTAATGCAAGATGTTTTCCGTAGTGTCAAGAAAGCCAATCAAGAAAAACAAAACTCTCATACTCACCGCGGCCGCCCTGCCCCTGCCTCAGCTCACTCAGCCACCGCGACCTCAAGCTTCCAGTTCGTCTCAGCCAGTCAAGCAGCGCCGCCGTTATCAAGCATCTCCGTCGCGGCCGTCGCGGCCCTGCAGTGGTCCGTCGCGCCGTCTCGTGCGTCCGTCTGTCGTCAGGTTCAGGTACGTCTGGCGTTCTTCTTCTTCTCCAGTGGTCCTGACCTTAGGAAAAAGGGGAACTAA 2124 0.452 MGCICSKESSNKDKVDEYEKEKEFSKSSVQLVAPAQFDGGGMDGSGPRLANPSSQAIWGCAQKLPDDKNLNSQHQKYKTIDEKKPLMSRILSVQHCVGQHIDAGWPIWLSSVAGEAIKGWVPRRADSFEKLDQIGQGAYSSVHKALDLETGKYVALKKVRFSSTDPESVRFMAREIYILRQLDHPNVIKLEGLVTSSTSTSLYLVLEYMEHDLAGLAATPGVKFTEAQIKCYMKQLLCGLEHCHNRGVLHRDIKGSNLLLDNNGNLKIGDFGLATVYEPDKKQPLTSRVVTLWYRAPELLLGATDYGAAIDLWSVGCILAELLVGKPIMPGRTEVEQMHKIFKLCGSPSEEYWKRTKFPHATSFKPQHRYKRQVADTFKSFSSVALALVDKLLAIEPDHRGSSTSALNSEFFTTNPLPCDPSSLPKFPPSKEFDAKRRDKEAIRKNTEAVKGRGPVSVLRGAGDTKVMETPEYNARGDISMRGKTNSRMSHSHLKYETQEDGGSHHKCEPTRVSLQNGYTHSSSMMHGGTAGPYSLNKRPETSKKNPELRKQSSLLNQEAADFSNSSTKKEPSRELGMGYVPKKNRIHCSGPLVPPGGNIDDMLREHERLMQDVFRSVKKANQEKQNSHTHRGRPAPASAHSATATSSFQFVSASQAAPPLSSISVAAVAALQWSVAPSRASVCRQVQVRLAFFFFSSGPDLRKKGN 707
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi464g00065 707 CDD STKc_CDK9_like 128 412 - -
Sebi464g00065 707 Pfam Protein kinase domain 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi464g00065 707 SMART serkin_6 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi464g00065 707 ProSitePatterns Protein kinases ATP-binding region signature. 134 157 IPR017441 GO:0005524
Sebi464g00065 707 FunFam probable serine/threonine-protein kinase At1g54610 211 452 - -
Sebi464g00065 707 ProSitePatterns Serine/Threonine protein kinases active-site signature. 248 260 IPR008271 GO:0004672|GO:0006468
Sebi464g00065 707 MobiDBLite consensus disorder prediction 475 577 - -
Sebi464g00065 707 MobiDBLite consensus disorder prediction 510 540 - -
Sebi464g00065 707 MobiDBLite consensus disorder prediction 419 445 - -
Sebi464g00065 707 MobiDBLite consensus disorder prediction 430 445 - -
Sebi464g00065 707 MobiDBLite consensus disorder prediction 490 508 - -
Sebi464g00065 707 FunFam probable serine/threonine-protein kinase At1g54610 115 210 - -
Sebi464g00065 707 PANTHER CELL DIVISION PROTEIN KINASE 126 418 - -
Sebi464g00065 707 Coils Coil 604 624 - -
Sebi464g00065 707 ProSiteProfiles Protein kinase domain profile. 128 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi464g00065 707 MobiDBLite consensus disorder prediction 620 642 - -
Sebi464g00065 707 SUPERFAMILY Protein kinase-like (PK-like) 121 420 IPR011009 -
Sebi464g00065 707 Gene3D Transferase(Phosphotransferase) domain 1 211 452 - -
Sebi464g00065 707 Gene3D Phosphorylase Kinase; domain 1 115 210 - -
Sebi464g00065 707 MobiDBLite consensus disorder prediction 549 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi464g00065 Sebi-Chr464 646434 651988 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi464g00065 120 451 Core Cell Cycle Gene Families AT5G10270 52.161 1.26e-117 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Sebi464g00065 Pkinase 1.5e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi464g00065 K08819 - gmx:100791743 891.723