Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi464g00056 ATGGGTAAACCAGATGGCAAAAGAGCTGCTCCTGGAAAGAAGGTCAGTGTTAAATATATCGGCAAGCTGAAAAAGGATGGGAAAATATTTGACTCAAATGTGGGAAGAGCACCCTTTAAATTTCGCCTTGGTGTAGGACAAGTCATCAAGGGGTGGGAGGTTGGAGTCAATGGGATGAGGGTTGGGGACAAAAGAAGAATCACAATCCCACCATCTATGGGATACGCAGACAAACGTGTTGGGAGCATACCACCAAATTCGTGGCTTGTATTTGATGTCGAGTTAGTTGATGTTGATCGCTGA 303 0.4488 MGKPDGKRAAPGKKVSVKYIGKLKKDGKIFDSNVGRAPFKFRLGVGQVIKGWEVGVNGMRVGDKRRITIPPSMGYADKRVGSIPPNSWLVFDVELVDVDR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi464g00056 100 FunFam Peptidyl-prolyl cis-trans isomerase 1 100 - -
Sebi464g00056 100 Gene3D - 1 100 IPR046357 GO:0003755
Sebi464g00056 100 SUPERFAMILY FKBP-like 4 98 - -
Sebi464g00056 100 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 12 99 IPR001179 GO:0003755
Sebi464g00056 100 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 1 99 - -
Sebi464g00056 100 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 7 96 IPR001179 GO:0003755
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi464g00056 Sebi-Chr464 578597 579386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi464g00056 12 96 Calmodulin-binding Proteins AT5G48570 49.438 5.68e-19 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi464g00056 K14826 - gmx:100792856 204.142